Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,305,111 T→C 5.8% K368R (AAG→AGG)  PP_2906 ← sensor histidine kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,305,1110TC 5.8% 234.4 / 2.1 78K368R (AAG→AGG) PP_2906sensor histidine kinase
Reads supporting (aligned to +/- strand):  ref base T (35/38);  new base C (2/3);  total (37/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCTTCATCGCTGCGATAGAACCGTTTCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAGGTAAAAATCATGCAGTTCTACCAGC  >  NC_002947/3304967‑3305260
                                                                                                                                                |                                                                                                                                                     
ccTTCATCGCTGCGATAGAACCGTTTCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATc                                                                                                                                                  <  2:2176983/150‑1 (MQ=255)
ccTTCATCGCTGCGATAGAACCGTTTCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACCTGATc                                                                                                                                                  >  1:283519/1‑150 (MQ=255)
 cTTCATCGCTGCGATAGAACCGTTTCAGNACAGCCGTTCGCTCTGCTNCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATACTGAAGGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATcg                                                                                                                                                 >  1:257968/1‑150 (MQ=255)
             gATAGAACCGTTTCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACccacca                                                                                                                                     <  1:1789611/150‑1 (MQ=255)
             gATAGAACCGTTTCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTACCCCCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACccacca                                                                                                                                     <  1:1227081/150‑1 (MQ=255)
                  aaCCGTTTCAGTACAGCCGTTCGCTCTGCTTCGGGCATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTc                                                                                                                                <  2:1947139/150‑1 (MQ=255)
                  aaCCGTTTCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTc                                                                                                                                <  2:2291525/150‑1 (MQ=255)
                  aaCCGTTTCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTc                                                                                                                                >  2:2325594/1‑150 (MQ=255)
                   aCCGTTTCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGAAAACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCg                                                                                                                               >  1:2230401/1‑150 (MQ=255)
                      gTTTCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATc                                                                                                                                                  >  2:1746060/1‑128 (MQ=255)
                      gTTTCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATc                                                                                                                                                  <  1:1746060/128‑1 (MQ=255)
                       tttCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGATGCTGAGCGCGTTACCCACCAGATTCGCCaa                                                                                                                           <  1:1242825/150‑1 (MQ=255)
                       tttCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCaa                                                                                                                           <  2:1864345/150‑1 (MQ=255)
                       tttCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCaa                                                                                                                           >  1:873102/1‑150 (MQ=255)
                             tACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACCTGATCGCGTTACCCACCAGATTCGCCAAGGCCTc                                                                                                                     <  2:283519/150‑1 (MQ=255)
                                cgCCGTTCGCTCTGCTTCGGCAATACCAGGCCCGCTATCCTCCCTCGCCATGTGTACGCCGCTGTCATCCTGCGTCGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGaa                                                                                                                  <  1:1721741/149‑1 (MQ=255)
                                       cGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTAACCACCAGAATTCCTGAGGCCTCGAACAGCAGt                                                                                                           >  1:1945607/1‑150 (MQ=255)
                                        gCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGtt                                                                                                          >  2:80470/1‑150 (MQ=255)
                                        gCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGtt                                                                                                          >  2:891389/1‑150 (MQ=255)
                                         ctctGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTc                                                                                                         >  1:1152729/1‑150 (MQ=255)
                                             gCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCgg                                                                                                     <  1:1394639/150‑1 (MQ=255)
                                              cTTCGGGAATACCAGGCCCGCTATCATCGATCGCCATGTGTGCGCAGCTGTGTGCCTGCGTTGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACTGCTGTTCGAggc                                                                                                    <  2:2230401/150‑2 (MQ=255)
                                                  gggAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGcc                                                                                                >  1:2194480/1‑150 (MQ=255)
                                                   ggAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCg                                                                                               >  2:2122443/1‑150 (MQ=255)
                                                       tACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCa                                                                                           >  1:461221/1‑150 (MQ=255)
                                                       tACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCa                                                                                           >  2:1001794/1‑150 (MQ=255)
                                                         ccAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAAc                                                                                         <  1:2405828/150‑1 (MQ=255)
                                                          cAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACg                                                                                        >  1:1830197/1‑150 (MQ=255)
                                                          cAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACg                                                                                        >  1:485866/1‑150 (MQ=255)
                                                          cAGGCCCGCTACCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTTAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACg                                                                                        >  1:1237472/1‑150 (MQ=255)
                                                                cGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTa                                                                                  <  2:1341264/150‑1 (MQ=255)
                                                                 gCTATCCTCGATCGCCATGTGTACGCCGCAGTCATCCTGCGTGGCGGTGATGCACAAACAAACACCCTCGCAGAAAGACTGTAGCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAg                                                                                 >  1:2123637/1‑150 (MQ=255)
                                                                       cTCNATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTgcgc                                                                           >  2:1508900/1‑150 (MQ=255)
                                                                       cTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGc                                                                                                 <  1:395000/128‑1 (MQ=255)
                                                                       cTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGc                                                                                                 >  2:395000/1‑128 (MQ=255)
                                                                       cTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTgcgc                                                                           >  2:498340/1‑150 (MQ=255)
                                                                          gATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAgg                                                                        >  2:2283499/1‑150 (MQ=255)
                                                                           aTCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGCGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGt                                                                       <  1:80470/150‑1 (MQ=255)
                                                                             cGCCATGTGCACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCCCCCGACCACCCTCGGGCGTGAACTTCATCGCGTTCCCCACCAGATTCGCCAAGGTCTCCAACAGTAGTTCGCGTTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTg                                                                     <  2:867708/150‑1 (MQ=255)
                                                                               ccATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAAc                                                                                         >  1:607835/1‑128 (MQ=255)
                                                                               ccATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAAc                                                                                         <  2:607835/128‑1 (MQ=255)
                                                                               ccATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGt                                                                   <  1:891389/150‑1 (MQ=255)
                                                                               ccATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGt                                                                   >  2:1657725/1‑150 (MQ=255)
                                                                                   gtgtACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCaa                                                               <  1:2175279/150‑1 (MQ=255)
                                                                                           cgcTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTGGCGGTCGCGGGGGGGCGGCGGTAGGTGCGCGGGTTGGTGCAATTGCAGtt                                                       <  2:873102/150‑1 (MQ=255)
                                                                                           cgcTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGcc                                                                                                >  1:2058597/1‑109 (MQ=255)
                                                                                           cgcTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGcc                                                                                                <  2:2058597/109‑1 (MQ=255)
                                                                                           cgcTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACCTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGcc                                                                                                >  1:2058333/1‑109 (MQ=255)
                                                                                           cgcTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACCTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGcc                                                                                                <  2:2058333/109‑1 (MQ=255)
                                                                                              tGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTcgc                                                                                                       >  2:654360/1‑99 (MQ=255)
                                                                                              tGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTcgc                                                                                                       <  1:654360/99‑1 (MQ=255)
                                                                                               gTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAAt                                                   >  2:813659/1‑150 (MQ=255)
                                                                                               gTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAAt                                                   <  1:498340/150‑1 (MQ=255)
                                                                                               gTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAAt                                                   <  1:1253470/150‑1 (MQ=255)
                                                                                                   tCCTGCGTGGCGGTGATGCGCACCCGGCCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATCAAATAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATgccg                                               <  1:1001794/150‑1 (MQ=255)
                                                                                                   tCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGt                                                                                                    >  2:1400796/1‑97 (MQ=255)
                                                                                                   tCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGt                                                                                                    <  1:1400796/97‑1 (MQ=255)
                                                                                                   tCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATgccg                                               >  1:1103504/1‑150 (MQ=255)
                                                                                                     cTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATgccgcc                                             >  1:12319/1‑150 (MQ=255)
                                                                                                      tGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAAcag                                                                                                               <  1:1365610/83‑1 (MQ=255)
                                                                                                      tGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAAcag                                                                                                               >  2:1365610/1‑83 (MQ=255)
                                                                                                        cGTGGCGGTGATGCGCACCCGACCACCCTCGGGTGTGAACTTGATCGTGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATc                                          <  2:1328293/150‑1 (MQ=255)
                                                                                                            gCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCg                                      <  2:1103504/150‑1 (MQ=255)
                                                                                                               gTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCACGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGcc                                   >  2:483597/1‑150 (MQ=255)
                                                                                                                 gATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCaa                                 <  2:1830197/150‑1 (MQ=255)
                                                                                                                  aTGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAAt                                >  2:1434697/1‑150 (MQ=255)
                                                                                                                   tGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATg                               <  1:2283499/150‑1 (MQ=255)
                                                                                                                      gcACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCa                            >  1:956481/1‑150 (MQ=255)
                                                                                                                        aCCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAgg                          <  1:1657725/150‑1 (MQ=255)
                                                                                                                                accCTCGGGCGTTAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCACAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAGGTAAAAATc                  <  2:1237472/150‑1 (MQ=255)
                                                                                                                                 cccTCGGGCGTGAACTTGATCGCGTTACCCACCAGTTTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAGGTAAAAATCa                 <  2:706723/150‑1 (MQ=255)
                                                                                                                                   cTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAGGTAAAAATCATg               <  1:959190/150‑1 (MQ=255)
                                                                                                                                   cTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAGGTAAAAATCATg               <  1:1574897/150‑1 (MQ=255)
                                                                                                                                    tCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGt                                                                   <  2:1119570/97‑1 (MQ=255)
                                                                                                                                    tCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGt                                                                   >  1:1119570/1‑97 (MQ=255)
                                                                                                                                    tCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAGGTAAAAATCATGc              >  1:1590266/1‑150 (MQ=255)
                                                                                                                                        gCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAGGTAAAAATCATGCAGtt          <  1:1434697/150‑1 (MQ=255)
                                                                                                                                              ccTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAGGTAAAAATCATGCAGTTCTACca    <  2:2123637/149‑1 (MQ=255)
                                                                                                                                                ttGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAGGTAAAAATCATGCAGTTCTACcagc  >  2:840991/1‑150 (MQ=255)
                                                                                                                                                ttGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAGGTAAAAATCATGCAGTTCTACcagc  <  2:1945607/150‑1 (MQ=255)
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CCTTCATCGCTGCGATAGAACCGTTTCAGTACAGCCGTTCGCTCTGCTTCGGGAATACCAGGCCCGCTATCCTCGATCGCCATGTGTACGCCGCTGTCATCCTGCGTGGCGGTGATGCGCACCCGACCACCCTCGGGCGTGAACTTGATCGCGTTACCCACCAGATTCGCCAAGGCCTCGAACAGCAGTTCGCGGTCGCCGTGCAACGCCGGTAGCTGCGCAGGTTGGTGCAATTGCAGTTGAATGCCGCCATCCTCGGCCAATGGCAGGTAAAAATCATGCAGTTCTACCAGC  >  NC_002947/3304967‑3305260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑