New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 100443 = | 51 (1.180) | 4 (0.110) | 4/220 | NT | 8.1% | intergenic (‑35/+87) | PP_0094/PP_0095 | 5'‑nucleotidase/hypothetical protein |
? | NC_002947 | 100525 = | 47 (1.250) | intergenic (‑117/+5) | PP_0094/PP_0095 | 5'‑nucleotidase/hypothetical protein |
TTTCTCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/100605‑100443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcatgcccgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAGCAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGTAGCCA > NC_002947/100525‑100671 TTTCTCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGG < 1:554988/150‑1 TTTCTCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGG < 2:984672/150‑1 TTTCTCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCACAAGTTCAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGG < 2:1062182/150‑1 TCTCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGC < 1:673401/150‑1 TCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCAT < 2:713735/150‑1 TCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGCTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCAT > 1:599513/1‑150 CCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATG > 2:463005/1‑150 TACAGCGCCGCCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCC > 2:105536/1‑150 CGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGC > 1:1048457/1‑150 CCCGCCCCCGCAGGATGAGTGGCCTCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAA > 2:99048/1‑150 CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAA > 1:733556/1‑150 CCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTC < 2:733556/150‑1 CCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAGCAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGT < 2:264979/150‑1 GAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAGCAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGTAGCCA < 1:12789/150‑1 TTTCTCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAGCACCTGGCCGAAGGCTACGATCAACCTGAATGACCGCATTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/100605‑100443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcatgcccgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAGCAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGTAGCCA > NC_002947/100525‑100671 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |