| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 171284 = | NA (NA) | 4 (0.100) | 4/242 | NT | NA | intergenic (+465/‑105) | PP_0159/PP_16SA | family III CoA‑transferase/16S ribosomal RNA |
| ? | NC_002947 | 171337 = | NA (NA) | intergenic (+518/‑52) | PP_0159/PP_16SA | family III CoA‑transferase/16S ribosomal RNA | |||||
TCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/171438‑171284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgaGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGACGGGAGCTTGCTCCTTGATTCAGCGGCGGACGGGTGAGT > NC_002947/171337‑171485 TCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGAT < 2:832910/150‑1TCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGAT > 1:931249/1‑150 GACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGC < 1:887606/150‑1 ACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGCT < 2:603013/150‑1 TTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGCTGA > 1:663196/1‑150 ATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGCTGAnaat < 2:699485/150‑5 TTGGGTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGCTAAGCCAAGTTTAGGGGTTTTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGTCTCAGATTTAACGCTGGCGGCAGGCCTAACCCA > 2:394957/1‑150 GCTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGC > 1:538115/1‑52 GCTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGC < 2:538115/52‑1 CTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCA > 1:601177/1‑150 TCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGC < 2:601177/150‑1 TCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGC > 2:350245/1‑150 TGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGACGGGAGCTTGCTCCTTGATTCAGCGGCGGACGGG < 1:632323/150‑1 GCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGACGGGAGCTTGCTCCTTGATTCAGCGGCGGACGGGT < 2:551097/150‑1 CTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGACGGGAGCTTGCTCCTTGA < 2:1131290/132‑1 CTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGACGGGAGCTTGCTCCTTGA > 1:1131290/1‑132 AGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGACGGGAGCTTGCTCCTTGATTCAGCGGCGGACGGGTGAGT > 1:53479/1‑150 AGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGACGGGAGCTTGCTCCTTGATTCAGCGGCGGACGGGTGAGT > 1:295414/1‑150 AGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGACGGGAGCTTGCTCCTTGATTCAGCGGCGGACG < 2:2348/143‑1 AGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGACGGGAGCTTGCTCCTTGATTCAGCGGCGGACG > 1:2348/1‑143 TCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTCGCATGGTCACTTGTGATGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/171438‑171284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgaGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGATGACGGGAGCTTGCTCCTTGATTCAGCGGCGGACGGGTGAGT > NC_002947/171337‑171485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |