| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 171434 | NA (NA) | 4 (0.100) | 4/244 | NT | NA | noncoding (46/1522 nt) | PP_16SA | 16S ribosomal RNA |
| ? | NC_002947 | = 171452 | NA (NA) | noncoding (64/1522 nt) | PP_16SA | 16S ribosomal RNA | |||||
TTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/171281‑171434‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagCTCCCGTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTC < NC_002947/171452‑171306 TTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG < 2:723932/150‑1TTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG < 2:842892/150‑1 TATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGC < 1:1079670/150‑1 CCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGCTCCCGTCATCCGCTCGACTTGCATGT > 1:842784/1‑124 CCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGCTCCCGTCATCCGCTCGACTTGCATGT < 2:842784/124‑1 TGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGCTCCCGTCATCCGCTCGACTTGCA < 1:640081/81‑1 TGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGCTCCCGTCATCAGCTCGACTTGCA > 2:640081/1‑81 aggnGCAAGCTCCCGTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGA > 2:696213/5‑150 GCAAGCTCCCGTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTC < 1:185613/150‑1 GCAAGCTCCCGTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTC > 2:860915/1‑150 AAGCTCCCGTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTC < 2:130867/150‑1 AAGCTCCCGTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTC < 2:856948/150‑1 TTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/171281‑171434‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagCTCCCGTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTTGGGTTTTTAAGAAACCCTAAACTTGGCTCAGCAATCTCAAATGACTATGTGATTTCTC < NC_002947/171452‑171306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |