New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 64040541 (0.950)4 (0.100) 4/234 NT 9.1% coding (343/1929 nt) PP_0551 MORN domain‑containing protein
?NC_002947 = 640429 42 (1.050)coding (319/1929 nt) PP_0551 MORN domain‑containing protein

GTGGCTGCCTGGGGTGATCAGGTCACCCAGGCCCTGAAACAGCCCCTCGGCGAACTGGCCGCGGTAGACCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/640247‑640405
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtagtcgatGGCCTGCTGCAGGGTGAGGGCCGGATCGACTACCCCAACGGCAGCTGGTACGCCGGCAGCTTCAAGGACGGCCAGTGGCACGGCCAGGGCGAATGGCATGGCCAGAACGGCGAGGTCTACCGCGGCCAGTTCGCCGAGGGGCTGTTTC  <  NC_002947/640429‑640282
                                                                                                                                                                                                                                                                                                                   
GTGGCTGCCTGGGGTGATCAGGTCACCCAGGCCCTGAAACAGCCCCTCGGCGAACTGGCCGCGGTAGACCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGG                                                                                                                                                               <  2:1012760/150‑1
 TGGCTGCCTGGGGTGATCAGGTCACCCAGGCCCTGAAACAGCCCCTCGGCGAACTGGCCGCGGTAGACCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGG                                                                                                                                                              >  1:734798/1‑150
    CTGCCTGGGGTGATCAGGTCACCCAGGCCCTGAAACAGCCCCTCGGCGAACTGGCCGCGGTAGACCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAG                                                                                                                                                           <  2:1080238/150‑1
                                                                          CGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATGGCCTGCTGCAGGGTGAGGGCCGGATCGA                                                                                                                         >  1:168428/1‑114
                                                                          CGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATGGCCTGCTGCAGGGTGAGGGCCGGATCGA                                                                                                                         <  2:168428/114‑1
                                                                           GTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATGGCCTGCTGCAGGGTGAGGGCCGGATCGACTAC                                                                                                                     >  1:795550/1‑117
                                                                           GTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATGGCCTGCTGCAGGGTGAGGGCCGGATCGACTAC                                                                                                                     <  2:795550/117‑1
                                                                                                                                                      GTAGTCGATGGCCTGCTGCAGGGTGAGGGCCTGATCGACTACCCCAACGGCAGCTGGTACGCCGGCAGCTTCAAGGACGGCCAGTGGCACGGCCAGGGCGAATGGCATGGCCAGAACGGCGAGGTCTACCGCGGCCAGTTCGCCGAG            <  1:673643/147‑1
                                                                                                                                                      GTAGTCGATGGCCTGCTGCAGGGTGAGGGCCGGATCGACTACCCCAACGGCAGCTGGTACGCCGGCAGCTTCAAGGACGGCCAGTGGCACGGCCAGGGCGAATGGCATGGCCAGAACGGCGAGGTCTACCGCGGCCAGTTCGCCGAG            >  2:673643/1‑147
                                                                                                                                                       TAGTCGATGGCCTGCTGCAGGGTGAGGGCCGGATCGACTACCCCAACGGCAGCTGGTACGCCGGCAGCTTCAAGGACGGCCAGTGGCACGGCCAGGGCGAATGGCATGGCCAGAACGGCGAGGTCTACCGCGGCCAGTTCGCCGAGGGGC        >  1:656575/1‑150
                                                                                                                                                             ATGGCCTGCTGCAGGGTGAGGGCCGGATCGACTACCCCAACGGCAGCTGGTACGCCGGCAGCTTCAAGGACGGCCAGTGGCACGGCCAGGGCGAATGGCATGGCCAGAACGGCGAGGTCTACCGCGGCCAGTTCGCCGAGGGGCTGTTTC  >  1:8971/1‑150
                                                                                                                                                                                                                                                                                                                   
GTGGCTGCCTGGGGTGATCAGGTCACCCAGGCCCTGAAACAGCCCCTCGGCGAACTGGCCGCGGTAGACCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/640247‑640405
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtagtcgatGGCCTGCTGCAGGGTGAGGGCCGGATCGACTACCCCAACGGCAGCTGGTACGCCGGCAGCTTCAAGGACGGCCAGTGGCACGGCCAGGGCGAATGGCATGGCCAGAACGGCGAGGTCTACCGCGGCCAGTTCGCCGAGGGGCTGTTTC  <  NC_002947/640429‑640282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.