| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1317119 = | 59 (1.360) | 7 (0.170) | 5/240 | NT | 11.5% | coding (531/1989 nt) | PP_1150 | membrane protein |
| ? | NC_002947 | 1317142 = | 52 (1.270) | coding (554/1989 nt) | PP_1150 | membrane protein | |||||
ACGTTGGCGCCCGCGATTGCCCTCGAACCAGGCATGTTCACGTTGGCTGTCGATGGCAACGATGCGCCCCAGGCTTTCCAGCAGGCCTTTGCGCGCCTCGTCCTCTCCGCCCAGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1317272‑1317119‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgcAGGCCGCCAGCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAGGGCAATCGCGGGCGCCAACGTGCCCGTGCCATTCGTGGC > NC_002947/1317142‑1317290 ACGTTGGCGCCCGCGATTGCCCTCGAACCAGGCATGTTCACGTTGGCTGTCGATGGCAACGATGCGCCCCAGGCTTTCCAGCAGGCCTTTGCGCGCCTCGTCCTCTCCGCCCAGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGC < 2:829860/150‑1 AGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCT‑‑‑‑‑‑‑GCC‑GCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAGGGCAAT > 2:393740/1‑150 ATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCT‑‑‑‑‑‑‑GCC‑GCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAGGGCAATCGC > 1:190635/1‑150 ATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCT‑‑‑‑‑‑‑GCC‑GCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAGGGCAATCGC > 1:191219/1‑150 CTGCAGGCCGTTCTGCCAGGCCTGCGGGCCGCCAGCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTG > 1:363845/1‑87 CTGCAGGCCGTTCTGCCAGGCCTGCGGGCCGCCAGCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTG < 2:363845/87‑1 CTGCAGGCCGTTCTGCCAGGCCTGCAGGCCGCCAGCGCCATGCTGGGCGGAGAGGACGAGGCGCGC > 1:143548/1‑66 CTGCAGGCCGTTCTGCCAGGCCTGCAGGCCGCCAGCGCCATGCTGGGCGGAGAGGACGAGGCGCGC < 2:143548/66‑1 TGCAGGCCGCCAGCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAGGGCAATCGCGGGCGCCAACGTGCCCGTGCCATTCGTG < 1:829860/150‑1 CAGGCCGCCAGCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAGGGCAATCGCGGGCGCCAACGTGCCCGTGCCATTCGTGGC > 1:754666/1‑150 ACGTTGGCGCCCGCGATTGCCCTCGAACCAGGCATGTTCACGTTGGCTGTCGATGGCAACGATGCGCCCCAGGCTTTCCAGCAGGCCTTTGCGCGCCTCGTCCTCTCCGCCCAGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1317272‑1317119‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgcAGGCCGCCAGCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAGGGCAATCGCGGGCGCCAACGTGCCCGTGCCATTCGTGGC > NC_002947/1317142‑1317290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |