| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1486848 | 35 (0.810) | 6 (0.140) | 4/244 | NT | 14.5% | coding (622/765 nt) | yhdZ | amino acid ABC transporter ATP‑binding protein |
| ? | NC_002947 | = 1486867 | 37 (0.890) | coding (641/765 nt) | yhdZ | amino acid ABC transporter ATP‑binding protein | |||||
GTGTGGCCATTGCCCGCGCGTTGTGCATGAAGCCCAAGATCATGCTGTTCGACGAGCCGACCTCGGCACTGGACCCGGAAATGGTCAAGGAAGTGCTCGATACCATGGTGGGCCTGGCCGAGGATGGCATGACCATGCTCTGCGTGACCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1486696‑1486848‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacgGTACGGGCAAAGCCCATTTCGTGGGTCACGCAGAGCATGGTCATGCCATCCTCGGCCAGGCCCACCATGGTATCGAGCACTTCCTTGACCATTTCCGGGTCCAGTGCCGAGGTCGGCTCGTCGAACAGCATGATCTTGGGCTTCATGC < NC_002947/1486867‑1486720 GTGTGGCCATTGCCCGCGCGTTGTGCATGAAGCCCAAGATCATGCTGTTCGACGAGCCGACCTCGGCACTGGACCCGGAAATGGTCAAGGAAGTGCTCGATACCATGGTGGGCCTGGCCGAGGATGGCATGACCATGCTCTGCGTGACCC > 2:740376/1‑150 ATGAAGCCCAAGATCATGCTGTTCGACGAGCCGACCTCGGCACTGGACCCGGAAATGGTCAAGGAAGTGCTCGATACCATGGTGGGCCTGGCCGAGGATGGCATGACCATGCTCTGCGTGACCCACGGTACGGGCAAAGCCCATTTCGTG < 2:917445/150‑1 gGAAGCCCAAGATCATGCTGTTCGACGAGCCGACCTCGGCACTGGACCCGGAAATGGTCAAGGAAGTGCTCGATACCATGGTGGGCCTGGCCGAGGATGGCATGACCATGCTCTGCGTGACCAACGGTACGGGCAAAGCCCATTTCGTGG < 2:722084/149‑1 CTCGGCACTGGACCCGGAAATGGTCAAGGAAGTGCTCGATACCATGGTGGGCCTGGCCGAGGATGGCATGACCATGCTCTGCGTGACCCACGGTACGGGCAAAGCCCATTTCGTGG > 1:372109/1‑116 CTCGGCACTGGACCCGGAAATGGTCAAGGAAGTGCTCGATACCATGGTGGGCCTGGCCGAGGATGGCATGACCATGCTCTGCGTGACCCACGGTACGGGCAAAGCCCATTTCGTGG < 2:372109/116‑1 AAGGAAGTGCTCGATACCATGGTGGGCCTGGCCGAGGATGGCATGACCATGCTCTGCGTGACCCACGGTACGGGCAAAGCCCATTTCGTGG > 1:983825/1‑91 AAGGAAGTGCTCGATACCATGGTGGGCCTGGCCGAGGATGGCATGACCATGCTCTGCGTGACCCACGGTACGGGCAAAGCCCATTTCGTGG < 2:983825/91‑1 CCACGGTACGGGCAAAGCCCATTTCGTGGGTCACGCAGAGCATGGTCATGCCATCCTCGGCCAGGCCCACCATGGTATCGAGCACTTCCTTGACCATTTCCGGGTCCAGTGCCGAGGTCGGCTCGTCGAACAGCATGATCTTGGGCTTC < 1:546853/149‑1 CCACGGTACGGGCAAAGCCCATTTCGTGGGTCACGCAGAGCATGGTCATGCCATCCTCGGCCAGGCCCACCATGGTATCGAGCACTTCCTTGACCATTTCCGGGTCCAGTGCCGAGGTCGGCTCGTCGAACAGCATGATCTTGGGCTTC > 2:546853/1‑149 CACGGTACGGGCAAAGCCCATTTCTTGGGTCACGCAGAGCATGGTCATGCCATCCTCGGCCAGGCCCACCATGGTATCGAGCACTTCCTTGACCATTTCCGGGTCCAGTGCCGAGGTCGGCTCGTCGAACAGCATGATCTTGGGCTTCAT > 2:753007/1‑150 CGGTACGGGCAAAGCCCATTTCGTGGGTCACGCAGAGCATGGTCATGCCATCCTCGGCCAGGCCCACCATGGTATCGAGCACTTCCTTGACCATTTCCGGGTCCAGTGCCGAGGTCGGCTCGTCGAACAGCATGATCTTGGGCTTCATGC < 2:199139/150‑1 GTGTGGCCATTGCCCGCGCGTTGTGCATGAAGCCCAAGATCATGCTGTTCGACGAGCCGACCTCGGCACTGGACCCGGAAATGGTCAAGGAAGTGCTCGATACCATGGTGGGCCTGGCCGAGGATGGCATGACCATGCTCTGCGTGACCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1486696‑1486848‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacgGTACGGGCAAAGCCCATTTCGTGGGTCACGCAGAGCATGGTCATGCCATCCTCGGCCAGGCCCACCATGGTATCGAGCACTTCCTTGACCATTTCCGGGTCCAGTGCCGAGGTCGGCTCGTCGAACAGCATGATCTTGGGCTTCATGC < NC_002947/1486867‑1486720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |