| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1487042 | 10 (0.230) | 7 (0.210) | 7/194 | NT | 47.3% | intergenic (+51/+79) | yhdZ/degS | amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS |
| ? | NC_002947 | = 1487072 | 8 (0.240) | intergenic (+81/+49) | yhdZ/degS | amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS | |||||
GAACCGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1486874‑1487042‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccttcgcgggcacgcccgctcccacaggAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGCGGCCGGTCGAAGAAGTCA < NC_002947/1487072‑1486928 GAACCGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGG < 2:148228/150‑1 TATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCG > 2:786724/1‑150 TTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCC < 1:863378/150‑1 TCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCC > 1:957573/1‑150 TGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTC > 1:146308/1‑111 TGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTC < 2:146308/111‑1 TGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGT < 2:957573/150‑1 GACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCACAGCCAGCGCTAATCCTGTG < 2:378521/150‑1 TTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGA < 2:926877/150‑1 TTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCC > 2:248535/1‑96 TTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCC < 1:248535/96‑1 TTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCCGCGTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGG > 2:222262/1‑145 TTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCCGCGTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGG < 1:222262/145‑1 CCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGG < 1:891409/131‑1 CCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGG > 2:891409/1‑131 TTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTG > 2:798336/1‑150 GCGGGCCCGTCTGCTCCCACATGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGC < 2:308004/150‑1 ACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGCGGCCGG > 2:945924/1‑150 GCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGCGGCCGGTCGAAG > 1:740714/1‑150 CACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGCGGCCGGTCGAAGAAGTC > 2:123341/1‑150 ACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGCGGCCGGTCGAAGAAGTCA > 1:786724/1‑150 ACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGG > 1:278913/1‑102 ACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGG < 2:278913/102‑1 GAACCGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1486874‑1487042‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccttcgcgggcacgcccgctcccacaggAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGCGGCCGGTCGAAGAAGTCA < NC_002947/1487072‑1486928 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |