New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1765109 =	53 (1.220)	3 (0.070)	3/248	NT	5.2%	coding (232/471 nt)	PP_1574	hypothetical protein
	?	NC_002947	1765141 =	57 (1.350)					coding (264/471 nt)	PP_1574	hypothetical protein

TCGTCTTTCCCAGGTCGTTGACCTCCCGAATAGCTACCAGCAGCGCGACGGACAGGTCGCCATCAAGAGATCCCAGGCGCTTGGTGCTCTCCGGGTCCTTCTCCAGTTCAACCGGGTCAAGCGGGCCGTGGGTAATGTCCAGCGGGCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1765259‑1765109 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctTGACCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGA  >  NC_002947/1765141‑1765197                                                                                                                                                                                                                  TCGTCTTTCCCAGGTCGTTGACCTCCCGAATAGCTACCAGCAGCGCGACGGACAGGTCGCCATCAAGAGATCCCAGGCGCTTGGTGCTCTCCGGGTCCTTCTCCAGTTCAACCGGGTCAAGCGGGCCGTGTGTAATGTCCAGCGGGCTGC                                                            >  1:1111297/1‑150  CGTCTTTCCCAGGTCGTTGACCTCCCGAATAGCTACCAGCAGCGCGACGGACAGGTCGCCATCAAGAGATCCCAGGCGCTTGGTGCTCTCCGGGTCCTTCTCCAGTTCAACCGGGTCAAGCGGGCCGTGGGTAATGTCCAGCGGGCTGCT                                                           <  1:1087158/150‑1                                AGCTACCAGCAGCGCGACGGCCAGGTCGCCATCAAGAGATCCCAGGCGCTTGGTGCTCTCCGGGTCCTTCTCCAGTTCAACCGGGTCAAGCAGCCCGCTGGACATTACCCACGGCCCGCTTGACCCGGTTGAACTGGAGAAGGACCCGGA                             <  2:173572/150‑1                                                                                               GTCCTTCTCCAGTTCAACCGGGTCAAGCGGGCCGTGGGTAATGTCCAGCGGGCTGCTTGACCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGA  >  1:316197/1‑114                                                                                               GTCCTTCTCCAGTTCAACCGGGTCAAGCGGGCCGTGGGTAATGTCCAGCGGGCTGCTTGACCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGA  <  2:316197/114‑1                                                                                                                                                                                                                  TCGTCTTTCCCAGGTCGTTGACCTCCCGAATAGCTACCAGCAGCGCGACGGACAGGTCGCCATCAAGAGATCCCAGGCGCTTGGTGCTCTCCGGGTCCTTCTCCAGTTCAACCGGGTCAAGCGGGCCGTGGGTAATGTCCAGCGGGCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1765259‑1765109 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctTGACCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGA  >  NC_002947/1765141‑1765197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.