New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1954184	43 (0.990)	3 (0.070)	3/246	NT	6.0%	coding (465/1494 nt)	PP_1752	hypothetical protein
	?	NC_002947	= 1954219	52 (1.240)					coding (500/1494 nt)	PP_1752	hypothetical protein

GCAACTGGTACAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1954036‑1954184 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccTTGAGCGATTTCAGCCGTGCCTTCATCTGCTTCTTGGACAGGTGGAACCAGAACTTGATGATCAGCGCACCTTCATCGCACAGCATCTCCTCCAGGCGTTCGGCACCGGTAATGGCCTGATCGAGCACGGCATCCTTGAACACCCCGT  <  NC_002947/1954219‑1954072                                                                                                                                                                                                                                                                                                           GCAACTGGTACAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTaca                                                                                                                                                     >  2:395308/1‑147                                                AAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCTTGAGCGATTTCAGCCGTGCCTTCATCTGCTTCTTGGGCAGGTGGAAC                                                                                                      <  2:773592/150‑1                                                                                                     GCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCTTGAGCGATTTCAGCCGTGCCTTCATCTGCTTCTTGGACAGGTGGAA                                                                                                       <  1:522362/96‑1                                                                                                     GCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCTTGAGCGATTTCAGCCGTGCCTTCATCTGCTTCTTGGACAGGTGGAA                                                                                                       >  2:522362/1‑96                                                                                                                                                   TCCTTGAGCGATTTCAGCCGTGCCTTCATCTGCTTCTTGGACAGGTGGAACCAGAACTTGATGATCAGCGCACCTTCATCGCACAGCATCTCCTCCAGGCGTTCGGCACCGGTAATGGCCTGATCGAGCACGGCATCCTTGAACACCCCG   <  2:385224/150‑1                                                                                                                                                   TCCTTGAGCGATTTCAGCCGTGCCTTCATCTGCGTCTTGGACAGGTGGAACCAGAAGCTGATGATCAGCGCACCTTCATCGCACAGCATCTCCTCCAGGCGTTCGGCACCGGTAATGGCCTGAGCGAGCACGGCATCCATGAACACCCCc   >  2:418697/1‑149                                                                                                                                                    CCTTGAGCGATTTCAGCCGTGCCTTCATCTGCTTCTTGGACAGGTGGAACCAGAACTTGATGATCAGCGCACCTTCATCGCACAGCATCTCCTCCAGGCGTTCGGCACCGGTAATGGCCTGATCGAGCACGGCATCCTTGAACACCCCGT  <  1:15834/150‑1                                                                                                                                                    CCTTGAGCGATTTCAGCCGTGCCTTCATCTGCTTCTTGCACAGGTGAAACCTGTTCTTCTTGTTCAGCGCACCTTCATCGCACAGCATCTCCTCCAGGCGTTCGGCACCGGTAATCGCCTGATCGAGCACGGCATCCTTGAACACCCCGT  <  2:30811/150‑1                                                                                                                                                                                                                                                                                                           GCAACTGGTACAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1954036‑1954184 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccTTGAGCGATTTCAGCCGTGCCTTCATCTGCTTCTTGGACAGGTGGAACCAGAACTTGATGATCAGCGCACCTTCATCGCACAGCATCTCCTCCAGGCGTTCGGCACCGGTAATGGCCTGATCGAGCACGGCATCCTTGAACACCCCGT  <  NC_002947/1954219‑1954072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.