| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2489095 | 47 (1.080) | 6 (0.140) | 6/246 | NT | 11.8% | coding (49/1578 nt) | PP_2184 | formate dehydrogenase subunit beta |
| ? | NC_002947 | = 2489113 | 44 (1.050) | coding (67/1578 nt) | PP_2184 | formate dehydrogenase subunit beta | |||||
CCTGTTTACTGCCTGGGGGCCTGTGCCTGCTCGCCAGCGCTGGAGCTGGACGGCCAGGTGCACGCGCGCCTCACCCCTGAGCGCCTGCGGGACTTGGTCAACGGTTGCCGGGAGGACTCAGCATGCTGAAGCTGTATATTCCCTGTGATTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2488943‑2489095‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggCACCCACG‑GCACG‑GGCTACCGAATCACAGGGAATATACAGCTTCAGCATGCTGAGTCCTCCCGGCAACCGTTGACCAAGTCCCGCAGGCGCTCAGGGGTGAGGCGCGCGTGCAC < NC_002947/2489113‑2489000 CCTGTTTACTGCCTGGGGGCCTGTGCCTGCTCGCCAGCGCTGGAGCTGGACGGCCAGGTGCACGCGCGCCTCACCCCTGAGCGCCTGCGGGACTTGGTCAACGGTTGCCGGGAGGACTCAGCATGCTGAAGCTGTATATTCCCTGTGATT < 2:104837/150‑1CCTGTTTACTGCCTGGGGGCCTGTGCCTGCTCGCCAGCGCTGGAGCTGGACGGCCAGGTGCACGCGCGCCTCACCCCTGAGCGCCTGCGGGACTTGGTCAACGGTTGCAGTGAGGACTCAGCATGCTGAAGCTGTATATTCCCTGTGATT > 1:10316/1‑150 GGCCAGGTGCACGCGCGCCTCACCCCTGAGCGCCTGCGGGACTTGGTCAACGGTTGCCGGGAGGACTCAGCATGCTGAAGCTGTATATTCCCTGTGATTCGGCACCCACG‑GCACG‑GGCTACCGAAT < 1:107925/126‑1 GGCCAGGTGCACGCGCGCCTCACCCCTGAGCGCCTGCGGGACTTGGTCAACGGTTGCCGGGAGGACTCAGCATGCTGAAGCTGTATATTCCCTGTGATTCGGCACCCACG‑GCACG‑GGCTACCGAAT > 2:107925/1‑126 CGCGCGCCTCACCCCTGAGCGCCTGCGGGACTTGGTCAACGGTTGCCGGGAGGACTCAGCATGCTGAAGCTGTATATTCCCTGTGATTCGGCACCCACG‑GCACG‑GGCTACCGAATCACA < 1:1059714/119‑1 CGCGCGCCTCACCCCTGAGCGCCTGCGGGACTTGGTCAACGGTTGCCGGGAGGACTCAGCATGCTGAAGCTGTATATTCCCTGTGATTCGGCACCCACG‑GCACG‑GGCTACCGAATCACA > 2:1059714/1‑119 CTGAAGCTGTATATTCCCTGTGATTCGGTAGCCCGT‑GCCGT‑GGGTGCCGAATCACAGGGAATATACAGCTTCAGCATGCTGAGTCCTCCCGGCAACCGTTGACCAAGTCCCGCAGGCGCTCAGGGGTGAGGCGCGCGTGCAC > 1:862651/1‑142 CTGAAGCTGTATATTCCCTGTGATTCGGTAGCC‑CGTGC‑CGTGGGTGCCGAATCACAGGGAATATACAGCTTCAGCATGCTGAGTCCTCCCGGCAACCGTTGACCAAGTCCCGCAGGCGCTCAGGGGTGAGGCGCGCGTGCAC < 2:862651/142‑1 CCTGTTTACTGCCTGGGGGCCTGTGCCTGCTCGCCAGCGCTGGAGCTGGACGGCCAGGTGCACGCGCGCCTCACCCCTGAGCGCCTGCGGGACTTGGTCAACGGTTGCCGGGAGGACTCAGCATGCTGAAGCTGTATATTCCCTGTGATTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2488943‑2489095‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggCACCCACG‑GCACG‑GGCTACCGAATCACAGGGAATATACAGCTTCAGCATGCTGAGTCCTCCCGGCAACCGTTGACCAAGTCCCGCAGGCGCTCAGGGGTGAGGCGCGCGTGCAC < NC_002947/2489113‑2489000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |