New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4131154 | 71 (1.640) | 7 (0.180) | 6/234 | NT | 10.3% | intergenic (+22/+90) | PP_3634/PP_3635 | GNAT family acetyltransferase/sulfonate ABC transporter permease |
? | NC_002947 | = 4131216 | 56 (1.400) | intergenic (+84/+28) | PP_3634/PP_3635 | GNAT family acetyltransferase/sulfonate ABC transporter permease |
CTATCTGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTG‑CATTGATCCGATGGCCTGTTCGCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4131009‑4131154 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggctCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCT < NC_002947/4131216‑4131068 CTATCTGCTTAACCAGCAGGGAGAGGATGCAATGATCGAAGCGGAGCAGCTGCGCGATGAGCGGCTGGGTGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTG‑CATTGATCCGATGGCCTGTTCGCGGGCTAGCC > 2:826600/1‑150 AATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTG‑CATTGATCCGATGGCTTCTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGG > 1:829202/1‑150 GAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTG‑CATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACG > 2:334430/1‑150 GCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTG‑CATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCT < 1:334430/150‑1 TGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTG‑CATTGATCCGATGGCCTGTTCGCGGG > 1:913151/1‑94 TGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTG‑CATTGATCCGATGGCCTGTTCGCGGG < 2:913151/94‑1 GATGAGCGGCATGATGGGCTTACGGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGACTTTG‑TCGGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGG < 1:619598/150‑1 GATCAGCGGCTCAACGGGGTGATCTCTCAATCCCAGGAATGTGTGCGCCAGCGCAAGAACGTG‑AATACTTCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGG < 1:619521/150‑1 GAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTG‑CATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACA < 2:999029/150‑1 AAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTG‑CATTGATCCGATGGCTTCTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCA < 2:829202/150‑1 GGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGC < 1:329630/150‑1 TCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCT > 2:446196/1‑150 CTATCTGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTG‑CATTGATCCGATGGCCTGTTCGCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4131009‑4131154 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggctCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCT < NC_002947/4131216‑4131068 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |