| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4345623 | 51 (1.180) | 6 (0.140) | 6/246 | NT | 11.2% | coding (1155/1308 nt) | PP_3818 | phosphate‑binding protein |
| ? | NC_002947 | = 4345670 | 46 (1.100) | coding (1202/1308 nt) | PP_3818 | phosphate‑binding protein | |||||
AGGAAGGAAGCGCCAGCCTGGATAACAAGGCCCTGCGCGACGTGCAGCGGGTGACAGAGTACCTGCGCCAGGCCGGGAAGCTGCAGGGCAAGGCAGTGCTGGTGGGGTTCGGCGACCCAAAGGAAACCCCTGGGCGCGCAGCCCTGCTCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4345472‑4345623‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccACGCCACCGCGCGCCAGTTCGCGGCGCACCGCTTGCGCACGTAGGCGGGAGAGCAGGGCTGCGCGCCCAGGGGTTTCCTTTGGGTCGCCGAACCCCAC < NC_002947/4345670‑4345573 AGGAAGGAAGCGCCAGCCTGGATAACAAGGCCCTGCGCGACGTGCAGCGGGTGACAGAGTACCTGCGCCAGGCCGGGAAGCTGCAGGGCAAGGCAGTGCTGGTGGGGTTCGGCGACCCAAAGGAAACCCCTGGGCGCGCAGCCCTGCTCT > 1:462340/1‑150 GAAGGAAGCGCCAGCCTGGATAACAAGGCCCTGCGCGACGTGCAGCGGGTGACAGAGTACCTGCGCCAGGCCGGGAAGCTGCAGGGCAAGGCAGTGCTGGTGGGGTTCGGCGACCCAAAGGAAACCCCTGGGCGCGCAGCCCTGCTCTCC > 1:1084389/1‑150 AGCGGGTGACAGAGTACCTGCGCCAGGCCGGGAAGCTGCAGGGCAAGGCAGTGCTGGTGGGGTTCGGCGACCCAAAGGAAACCCCTGGGCGCGCAGCCCTGCTCTCCACGCCACCGCGCGCCAGTTCGCGGCGCACCGCTTGCGCACGTA < 1:815069/150‑1 GTGACAGAGTACCTGCGCCAGGCCGGGAAGCTGCAGGGCAAGGCAGTGCTGGTGGGGTTCGGCGACCCAAAGGAAACCCCTGGGCGCGCAGCCCTGCTCTCCACGCCACCGCGCGCCAGTTCGCGGCGCACCGCTTGCGCACGTAGGCGG < 2:462340/150‑1 TGCTGGTGGGGTTCGGCGACCCAAAGGAAACCCCTGGGCGCGCAGCCCTGCTCTCCACGCCACCGCGCGCCAGTTCGCGGCGCACCGCTTGCGCACGTAGGCGGGA < 1:692515/106‑1 TGCTGGTGGGGTTCGGCGACCCAAAGGAAACCCCTGGGCGCGCAGCCCTGCTCTCCACGCCACCGCGCGCCAGTTCGCGGCGCACCGCTTGCGCACGTAGGCGGGA > 2:692515/1‑106 CCCTGCTCTCCACGCCACCGCGCGCCAGTTCGCGGCGCACCGCTTGCGCACGTAG > 1:194064/1‑55 CCCTGCTCTCCACGCCACCGCGCGCCAGTTCGCGGCGCACCGCTTGCGCACGTAG < 2:194064/55‑1 CTCCACGCCACCGCGCGCCAGTTCGCGGCGCACCGCTTGCGCACGTAGGCGGGAGAGCAGGGCTGCGCGCCCAGGGGTTTCCTTTGGGTCGCCGAACCCCAC < 1:981862/102‑1 CTCCACGCCACCGCGCGCCAGTTCGCGGCGCACCGCTTGCGCACGTAGGCGGGAGAGCAGGGCTGCGCGCCCAGGGGTTTCCTTTGGGTCGCCGAACCCCAC > 2:981862/1‑102 AGGAAGGAAGCGCCAGCCTGGATAACAAGGCCCTGCGCGACGTGCAGCGGGTGACAGAGTACCTGCGCCAGGCCGGGAAGCTGCAGGGCAAGGCAGTGCTGGTGGGGTTCGGCGACCCAAAGGAAACCCCTGGGCGCGCAGCCCTGCTCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4345472‑4345623‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccACGCCACCGCGCGCCAGTTCGCGGCGCACCGCTTGCGCACGTAGGCGGGAGAGCAGGGCTGCGCGCCCAGGGGTTTCCTTTGGGTCGCCGAACCCCAC < NC_002947/4345670‑4345573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |