| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4604060 | 23 (0.530) | 8 (0.200) | 8/240 | NT | 27.2% | intergenic (+1345/‑157) | PP_4074/PP_4076 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 4604072 | 21 (0.510) | intergenic (+1357/‑145) | PP_4074/PP_4076 | hypothetical protein/hypothetical protein | |||||
CCCTACCTGTTCATCGTCAATCGCCTGGCCCACTACATCAAGGTGCTGCAGCGCGAGCAGATCGGCAGCTGGAAGGAGCGAC‑‑GGGACCTTGAGTCCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4603909‑4604060‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccgaCGGCTGCGCA‑‑CATCGGCCGAAGGGTTTTCCTGGTCGGCGACGTATTGCTTGATCTATTTGTTGAGTTCGGACTCAAGGTCCCGTCGCTCCTTCCAGCTGCCGATCTGCTCGCGCTGCAGCACCTTGATGTAGTGGGCCAGGCGATTGA < NC_002947/4604072‑4603925 CCCTACCTGTTCATCGTCAATCGCCTGGCCCACTACATCAAGGTGCTGCAGCGCGAGCAGATCGGCAGCTGGAAGGAGCGAC‑‑GGGACCTTGAGTCCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGGCC > 1:506156/1‑150CCCTACCTGTTCATCGTCAATCGCCTGGCCCACTACATCAAGGTGCTGCAGCGCGAGCAGATCGGCAGCTGGAAGGAGCGAC‑‑GGGACCTTGAGTCCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGGCC > 1:883552/1‑150 CGTCAATCGCCTGGCCCACTACATCAAGGTGCTGCAGCGCGAGCAGATCGGCAGCTGGAAGGAGCGAC‑‑GGGACCTTGAGTCCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGGCCGACGGCTGCGCA‑‑CA < 1:698475/150‑1 ATCGCCTGGCCCACTACATCAAGGTGCTGCAGCGCGAGCAGATCGGCAGCTGGAAGGAGCGACATGGGTCC‑‑ACTTGCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTGCGGCCGACGGCTGCGCA‑‑CATCGGC < 1:748371/150‑1 ATCAAGGTGCTGCAGCGCGAGCAGATCGGCAGCTGGAAGGAGCGAC‑‑GGGACCTTGAGTCCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGG < 1:212953/112‑1 ATCAAGGTGCTGCAGCGCGAGCAGATCGGCAGCTGGAAGGAGCGAC‑‑GGGACCTTGAGTCCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGG > 2:212953/1‑112 GAGCAGATCGGCAGCTGGAAGGAGCGAC‑‑GGGACCTTGAGTCCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGGCCGACGGCTGCGCA‑‑CATCGG > 1:585128/1‑114 GAGCAGATCGGCAGCTGGAAGGAGCGAC‑‑GGGACCTTGAGTCCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGGCCGACGGCTGCGCA‑‑CATCGG < 2:585128/114‑1 GCAGCTGGAAGGAGCGAC‑‑GGGACCTTGAGTCCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGGCCGACGGCTGCGCA‑‑CATCGGCCGAAGG > 1:803043/1‑111 GCAGCTGGAAGGAGCGAC‑‑GGGACCTTGAGTCCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGGCCGACGGCTGCGCA‑‑CATCGGCCGAAGG < 2:803043/111‑1 GAAAACCCTTCGGCCGATG‑‑TGCGCAGCCGTCGGCCGAAGGGTTTTCCTGGTCGGCGACGTATTGCTTGATCTATTTGTTGAGTTCGGACTCAAGGTCCCGTCGCTCCTTCCAGCTGCCGATCT < 1:391983/123‑1 GAAAACCCTTCGGCCGATG‑‑TGCGCAGCCGTCGGCCGAAGGGTTTTCCTGGTCGGCGACGTATTGCTTGATCTATTTGTTGAGTTCGGACTCAAGGTCCCGTCGCTCCTTCCAGCTGCCGATCT > 2:391983/1‑123 GACGGCTGCGCA‑‑CATCGGCCGAAGGGTTTTCCTGGTCGGCGACGTATTGCTTGATCTATTTGTTGAGTTCGGACTCAAGGTCCCGTCGCTCCTTCCAGCTGCCGATCTGCTCGCGCTGCAGCACCTTGATGTAGTGGGCCAGGCGATTGA < 1:1000595/150‑1 CCCTACCTGTTCATCGTCAATCGCCTGGCCCACTACATCAAGGTGCTGCAGCGCGAGCAGATCGGCAGCTGGAAGGAGCGAC‑‑GGGACCTTGAGTCCGAACTCAACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4603909‑4604060‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccgaCGGCTGCGCA‑‑CATCGGCCGAAGGGTTTTCCTGGTCGGCGACGTATTGCTTGATCTATTTGTTGAGTTCGGACTCAAGGTCCCGTCGCTCCTTCCAGCTGCCGATCTGCTCGCGCTGCAGCACCTTGATGTAGTGGGCCAGGCGATTGA < NC_002947/4604072‑4603925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |