New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5059687 = | 43 (0.990) | 3 (0.070) | 3/242 | NT | 7.1% | coding (1195/1581 nt) | PP_4458 | opine ABC transporter substrate‑binding protein |
? | NC_002947 | 5059708 = | 37 (0.900) | coding (1174/1581 nt) | PP_4458 | opine ABC transporter substrate‑binding protein |
GGTTAAAACTCAAATCGGTTGTTTCCAACGCGGCCCCGCAATTGCCGATCATGGAGATTATCCAAGCCCAGCTGGCCAAGGCAGGTATCACCTTGGAAATGGAAGTCGTG‑GATCACGCGACTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5059809‑5059687 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacttCCATTTCCAAGGTGATACCTGCCTTGGCCAGCTGGGCTTGGATAATCTCCATGATCGGCAATTGCGGGGCCGCGTTGGAAACAACCGATTTGAGTTTTAACCCGTTGGGATAACCCGCGCTGGCCAACAAGGCTTTCGCGTGCGCA > NC_002947/5059708‑5059853 GGTTAAAACTCAAATCGGTTGTTTCCAACGCGGCCCCGCAATTGCCGATCATGGAGATTATCCAAGCCCAGCTGGCCAAGGCAGGTATCACCTTGGAAATGGAAGTCGCGTGATC‑CACGACTTCCATTTCCAAGGTGATACCTGCCTTGG < 1:474466/150‑1 TCAAATCGGTTGTTTCCAACGCGGCCCCGCAATTGCCGATCATGGAGATTATCCAAGCCCAGCTGGCCAAGGCAGGTATCACCTTGGAAATGGAAGTCGCGTGATC‑CACGACTTCCATTTCCAAGGTGATACCTGCCTTG > 1:254247/1‑140 TCAAATCGGTTGTTTCCAACGCGGCCCCGCAATTGCCGATCATGGAGATTATCCAAGCCCAGCTGGCCAAGGCAGGTATCACCTTGGAAATGGAAGTCGCGTGATC‑CACGACTTCCATTTCCAAGGTGATACCTGCCTTG < 2:254247/140‑1 cCTTCCATTTCCAAGGTGATACCTGCCTTGGCCAGCTGGGCTTGGATAATCTCCATGATCGGCAATTGCGGGGCCGCGTTGGAAACAACCGATTTGAGTTTTAACCCGTTGGGATAACCCGCGCTGGCCAACAAGGCTTTCGCGTGCGCA < 2:816425/149‑1 TTCCATTTCCAAGGTGATACCTGCCTTGGCCAGCTGGGCTTGGATAATCTCCATGATCGGCAATTGCGGGGCCGCGTT < 1:410027/78‑1 TTCCATTTCCAAGGTGATACCTGCCTTGGCCAGCTGGGCTTGGATAATCTCCATGATCGGCAATTGCGGGGCCGCGTT > 2:410027/1‑78 GGTTAAAACTCAAATCGGTTGTTTCCAACGCGGCCCCGCAATTGCCGATCATGGAGATTATCCAAGCCCAGCTGGCCAAGGCAGGTATCACCTTGGAAATGGAAGTCGTG‑GATCACGCGACTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5059809‑5059687 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacttCCATTTCCAAGGTGATACCTGCCTTGGCCAGCTGGGCTTGGATAATCTCCATGATCGGCAATTGCGGGGCCGCGTTGGAAACAACCGATTTGAGTTTTAACCCGTTGGGATAACCCGCGCTGGCCAACAAGGCTTTCGCGTGCGCA > NC_002947/5059708‑5059853 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |