New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 535053029 (0.670)7 (0.170) 6/242 NT 17.8% intergenic (+19/+63) PP_4704/PP_4705 hypothetical protein/glyoxalase
?NC_002947 = 5350559 37 (0.900)intergenic (+48/+34) PP_4704/PP_4705 hypothetical protein/glyoxalase

GCCAGCAGCATCAAGGACTATCTGGTCGACAAGGGCAAGCTGGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCAGGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5350377‑5350530
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcTCCCACAGGTAGTGCGCA‑GGCCTGTGGGGGCGGGCCTGCCAGAGGGGATTACTCGGCATCCAGGTGCATCGGTGTCACCACCCGGCCATCGCTTTGAGGCTGCCCCAGGCTGGTATCGATGAAGTACACCCGGTCGTCTTCCAGCTTG  <  NC_002947/5350559‑5350412
                                                                                                                                                                                                                                                                                                               
GCCAGCAGCATCAAGGACTATCTGGTCGACAAGGGCAAGCTGGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCAGGC                                                                                                                                                           >  2:363558/1‑150
 CCAGCAGCATCAAGGACTATCTGGTCGACAAGGGCAAGCTGGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCAGGCC                                                                                                                                                          >  1:558408/1‑150
  CAGCAGCATCAAGGACCATCTGGTCGACAAGGGCAAGCTGGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCAGGCCC                                                                                                                                                         >  2:728645/1‑150
                                     AGCTGGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCAGGCCCGCTCCCACAGGTAGTGCGCA‑GGCCTGTGGGGGCGG                                                                                                                     <  2:112852/150‑1
                                                              CATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCACGCCCGCTCCCACAGGTAGTGCGCA‑GGCCTGTGGGGGCGG                                                                                                                     <  1:610649/125‑1
                                                              CATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCACGCCCGCTCCCACAGGTAGTGCGCA‑GGCCTGTGGGGGCGG                                                                                                                     >  2:610649/1‑125
                                                                                GCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCAGGCCCGCTCCCACAGGTAGTGCGCA‑GGCCTGTGGGGGC                                                                                                                       <  1:208915/105‑1
                                                                                GCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCAGGCCCGCTCCCACAGGTAGTGCGCA‑GGCCTGTGGGGGC                                                                                                                       >  2:208915/1‑105
                                                                                                                                CGAGTAATCCCCTCTGGCAGGCCCGCCCCCACAGG‑CCTGCGCACTACCTGTGGGAGCGGGCCTGCCAGAGGGGATTACTCGGCATCCAGGTGCATCGGTGTCACCACCCGGCCATCGCTTTGAGGCTGCCCCAGGCTGGTATC                                 <  1:928907/143‑1
                                                                                                                                CGAGTAATCCCCTCTGGCAGGCCCGCCCCCACAGG‑CCTGCGCACTACCTGTGGGAGCGGGCCTGCCAGAGGGGATTACTCGGCATCCAGGTGCATCGGTGTCACCACCCGGCCATCGCTTTGAGGCTGCCCCAGGCTGGTATC                                 >  2:928907/1‑143
                                                                                                                                                      CCGCTCCCACAGGTAGTGCGCA‑GGCCTGTGGGGGCGGGCCTGCCAGAGGGGATTACTCGGCATCCAGGTGCATCGGTGTCACCACCCGGCCATCGCTTTGAGGCTGCCCCAGGCTGGTATCGATGAAGTACACCCGGTCGTCTTCCAGCT    >  1:728645/1‑150
                                                                                                                                                        GCTCCCACAGGTAGTGCGCA‑GGCCTGTGGGGGCGGGCCTGCCAGAGGGGATTACTCGGCATCCAGGTGCATCGGTGTCACCACCCGGCCATCGCTTTGAGGCTGCCCCAGGCTGGTATCGATGAAGTACACCCGGTCGTCTTCCAACTTG  >  2:409672/1‑150
                                                                                                                                                                                                                                                                                                               
GCCAGCAGCATCAAGGACTATCTGGTCGACAAGGGCAAGCTGGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCAGGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5350377‑5350530
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcTCCCACAGGTAGTGCGCA‑GGCCTGTGGGGGCGGGCCTGCCAGAGGGGATTACTCGGCATCCAGGTGCATCGGTGTCACCACCCGGCCATCGCTTTGAGGCTGCCCCAGGCTGGTATCGATGAAGTACACCCGGTCGTCTTCCAGCTTG  <  NC_002947/5350559‑5350412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.