| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681340 | 47 (1.080) | 4 (0.090) | 5/248 | NT | 8.1% | intergenic (‑6/+202) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | = 5681363 | 45 (1.060) | intergenic (‑29/+179) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
AGCGTGCCGCCGTAGATGGAGAAGCTGACGATCTTCCACGGGTCGCCTTGCAGGCCCGCGGCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5681189‑5681340‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacCCAGCCCACCTCAGGAGGTCTGTGTTTGCATGTATTACGGTGAACGCTTCAACGCCTGGACCCACCTGGTCGGTGCCGTCCTCGCTGCTATTGGTGCCATCTGGCTGATCGTGGCCGCGGGCCTGCAAGGCGACCCGTGGAAGATCGTC < NC_002947/5681363‑5681215 AGCGTGCCGCCGTAGATGGAGAAGCTGACGATCTTCCACGGGTCGCCTTGCAGGCCCGCGGCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAA < 2:1032858/150‑1 CCGCGGCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAA > 1:887690/1‑96 CCGCGGCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAA < 2:887690/96‑1 ACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACCCAGCCCACCTCAGGAGGTCTGTGT > 1:803449/1‑97 ACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACCCAGCCCACCTCAGGAGGTCTGTGT < 2:803449/97‑1 ACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACCCAGCCCACCTCAGGAGGTCTGTGTTTGCA > 1:551014/1‑81 ACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACCCAGCCCACCTCAGGAGGTCTGTGTTTGCA < 2:551014/81‑1 ATGCAAACACAGACCTCCTGAGGAGGGCTGGGTTTGCATGTATTACGGTGAACGCTTCAACGCCTGGACCCACCTGGTCGGTGCCGTCCTCGCTGCTATTGGTGCCATCTGGCTGATCGTGGCCGCGGGCCTGCAAGGCGACCCGTGGAA > 2:297449/1‑150 CCCAGCCCACCTCAGGAGGTCTGTGTTTGCATGTATTACGGTGAACGCTTCAACGCCTGGACCCACCTGGTCGGTGCCGTCCTCGCTGCTATTGGTGCCATCTGGCTGATCGTGGCCGCGGGCCTGCAAGGCGACCCGTGGAAGATCGTC > 1:408831/1‑150 CCCAGCCCACCTCAGGAGGTCTGTGTTTGCATGTATTACGGTGAACGCTTCAACGCCTGGACCCACCTGGTCGGTGCCGTCCTCGCTGCTATTGGTGCCATCTGGCT > 1:34929/1‑107 CCCAGCCCACCTCAGGAGGTCTGTGTTTGCATGTATTACGGTGAACGCTTCAACGCCTGGACCCACCTGGTCGGTGCCGTCCTCGCTGCTATTGGTGCCATCTGGCT < 2:34929/107‑1 AGCGTGCCGCCGTAGATGGAGAAGCTGACGATCTTCCACGGGTCGCCTTGCAGGCCCGCGGCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5681189‑5681340‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacCCAGCCCACCTCAGGAGGTCTGTGTTTGCATGTATTACGGTGAACGCTTCAACGCCTGGACCCACCTGGTCGGTGCCGTCCTCGCTGCTATTGGTGCCATCTGGCTGATCGTGGCCGCGGGCCTGCAAGGCGACCCGTGGAAGATCGTC < NC_002947/5681363‑5681215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |