New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5856870 = | 57 (1.320) | 5 (0.120) | 5/246 | NT | 8.3% | coding (741/1392 nt) | PP_5133 | membrane protein |
? | NC_002947 | 5856915 = | 56 (1.340) | coding (786/1392 nt) | PP_5133 | membrane protein |
CCAGGTCCAGCGTCAGGCGTTCACGGCCCTGGCGCCAGCGCCACAGGCATAACCCGGCCAGCAGCAGGCGGGGCAGCAGGCCGTATACCAGCACCACGCCGAGCAGCCAGCTGGCCCAGGCCTGGCGGGCCACGTCCAGGGCT‑GGCAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5857021‑5856870 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTACGCGCAACTGCGCGAGGCACTGATGCCG > NC_002947/5856915‑5857062 CCAGGTCCAGCGTCAGGCGTTCACGGCCCTGCCGCCACCGCCTATCAGATCTTCCTGCCAGCAGCAGGCGGGGCAGCAGGCCGTATACCAGCACCACGCCGAGCAGCCAGCTGGCCCAGGCCTGGCGGGCCACGTCCAGGGCT‑GGCAGGC > 1:749162/1‑150 CAGGTCCAGCGTCAGGCGTTCACGGCCCTGGCGCCAGCGCCACAGGCATAACCCGGCCAGCAGCAGGCGGGGCAGCAGGCCGTATACCAGCACCACGCCGAGCAGCCAGCTGGCCCAGGCCTGGCGGGCCACGTCCAGGGCT‑GGCAGGCT < 2:464552/150‑1 AGCCAGCTGGCCCAGGCCTGGCGGGCCACGTCCAGGGCT‑GGCAGGCTGGCTGCTCGGCGTGGTGCTGGTATACGGACTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGA > 1:687723/1‑150 CCAGGCCTGGCGGGCCACGTCCAGGGCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGC < 1:390707/82‑1 CCAGGCCTGGCGGGCCACGTCCAGGGCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGC > 2:390707/1‑82 AGGCCTGGCGGGCCACGTCCAGGGCT‑GGCAGGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCT > 1:296221/1‑128 AGGCCTGGCGGGCCACGTCCAGGGCT‑GGCAGGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCT < 2:296221/128‑1 TGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTACGCGCAACTGCGCGAGGCACTGATGCCG > 1:540514/1‑150 CCAGGTCCAGCGTCAGGCGTTCACGGCCCTGGCGCCAGCGCCACAGGCATAACCCGGCCAGCAGCAGGCGGGGCAGCAGGCCGTATACCAGCACCACGCCGAGCAGCCAGCTGGCCCAGGCCTGGCGGGCCACGTCCAGGGCT‑GGCAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5857021‑5856870 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTACGCGCAACTGCGCGAGGCACTGATGCCG > NC_002947/5856915‑5857062 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |