| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 401300 = | 16 (0.370) | 10 (0.240) | 4/246 | NT | 24.8% | coding (883/1059 nt) | PP_0334 | transposase |
| ? | NC_002947 | 3969010 = | 45 (1.070) | coding (1094/1179 nt) | PP_3498 | transposase | |||||
ATGTATTCCGCCTTCTTCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAA > NC_002947/401153‑401445 | gggtcaatgttcactagcaggggttggagcacctagcgccccggtggcattacccggttggtctgaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGAt < 2:618516‑M1/3‑1 (MQ=255) ggtcaatgttcactagcaggggttggagcgcctagcgccccggtggcattacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGAtt < 2:44739‑M1/4‑1 (MQ=255) ttggagcgcctagcgccccggtggcattacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcaGATTCCGATCAGCCAGA‑TGATcgccg < 2:87042‑M1/26‑1 (MQ=255) aTTGGGCAAGATGAGCAAGCGCGGTGACGGCTACAT‑‑GCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGG > 2:494580‑M2/1‑150 (MQ=255) ttGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAG < 2:339565‑M2/150‑1 (MQ=255) ttGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAG > 1:836333‑M2/1‑150 (MQ=255) gtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAagga > 1:618516‑M1/88‑150 (MQ=255) tcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAaggagg > 1:44739‑M1/87‑150 (MQ=255) tcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAaggagg > 2:647894‑M1/87‑150 (MQ=255) gggCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGC > 1:1004768‑M2/1‑150 (MQ=255) ggCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCG < 1:963109‑M2/150‑1 (MQ=255) ggCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCG < 1:963091‑M2/150‑1 (MQ=255) agaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc > 2:1098006‑M1/85‑150 (MQ=255) gCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGG < 1:361288‑M2/150‑1 (MQ=255) cAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGC < 2:994106‑M2/150‑1 (MQ=255) gATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGAT < 1:662580‑M2/150‑1 (MQ=255) gATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGAT > 2:662580‑M2/1‑150 (MQ=255) ttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCg > 1:87042‑M1/56‑150 (MQ=255) cggatgatCCAGGGCTCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTgg < 2:252242/148‑1 (MQ=17) tgatgaTCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATC < 1:298708‑M2/116‑1 (MQ=255) tgatgaTCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATC > 2:298708‑M2/1‑116 (MQ=255) gatgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGc > 1:188262/1‑150 (MQ=32) gatgatACAGGGCGCGCCTTCCATCTGGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGATGTTGCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGc < 1:1093304/150‑1 (MQ=11) tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTggg < 2:69955/144‑1 (MQ=32) tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTggg > 1:69955/1‑144 (MQ=32) cctgatcgctctgtaacagggcccatataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAagga < 2:910361‑M1/62‑1 (MQ=255) cctgatcgctctgtaacagggcccatataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAagga > 1:910361‑M1/37‑98 (MQ=255) aGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTAc > 1:1002750/1‑150 (MQ=32) gcgcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACaga < 2:1074912/150‑1 (MQ=32) gcgcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACaga < 1:597098/150‑1 (MQ=32) gcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGG > 2:1112230‑M2/1‑92 (MQ=255) gcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGG < 1:1112230‑M2/92‑1 (MQ=255) tctgtaacagggcccatataatccgcaGATTTCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAaggagg < 2:649537‑M1/64‑1 (MQ=255) tctgtaacagggcccatataatccgcaGATTTCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAaggagg > 1:649537‑M1/28‑91 (MQ=255) aTTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGGGCGagc < 2:275327/150‑3 (MQ=17) ttCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCa < 1:792278/150‑1 (MQ=32) tCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAg < 1:339565/150‑1 (MQ=32) ccGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAgg < 2:113990/150‑1 (MQ=32) ttGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTAc < 2:473643/150‑1 (MQ=32) ggCCAGCTAAGGCCTGATTCCGTTCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCaa < 2:279788/149‑1 (MQ=17) ccAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACg < 2:361288/150‑1 (MQ=32) tAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAAc < 1:155931/150‑1 (MQ=32) gCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaa < 1:316108/150‑1 (MQ=32) | ATGTATTCCGCCTTCTTCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAA > NC_002947/401153‑401445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |