| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1684505 | 42 (0.970) | 3 (0.070) | 3/244 | NT | 7.5% | coding (1042/1107 nt) | PP_1478 | xenobiotic reductase |
| ? | NC_002947 | = 1684534 | 34 (0.820) | coding (1071/1107 nt) | PP_1478 | xenobiotic reductase | |||||
ATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAGGATGTCACTTACCCATTGGTTAATGCTCTTTTCCGCCAGTTCGGCT > NC_002947/1684364‑1684650 | aTGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAg > 2:744705/1‑150 (MQ=255) gATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTa > 1:50444/1‑150 (MQ=255) aTCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGGGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGtgc > 1:816084/1‑148 (MQ=255) cACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCa > 2:279962/1‑150 (MQ=255) aCTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTTATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCaa > 2:491465/1‑150 (MQ=255) gAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAgg < 2:246885/150‑1 (MQ=255) aCCTGCCCAGGCCGAGTACATTCTGCGTACCGGGCAGGCCGCCGTGATGTACCCTGTACTACATTGTCGGCTCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGCCCACTTGGCCGGCGCAGTACCAAAGGGc < 1:976391/150‑1 (MQ=255) gCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCcgc > 2:451459/1‑150 (MQ=255) gCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCgccaa > 1:777891‑M2/1‑145 (MQ=255) caTTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCgcggctggtcaccctttggtactgcgccggccaagtg < 1:837953‑M1/150‑38 (MQ=255) ttCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGa < 1:241437/150‑1 (MQ=255) ttCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGa > 1:866564/1‑150 (MQ=255) cggCGTACCGGGCAGGCGGACGTGAGCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATa < 2:96963/148‑1 (MQ=255) tGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAg > 2:267601/1‑124 (MQ=255) tGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAg < 1:267601/124‑1 (MQ=255) tGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATAc > 2:408735/1‑150 (MQ=255) tACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGa < 2:315072/150‑1 (MQ=255) tACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGa > 2:747227/1‑150 (MQ=255) cGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGGGTc < 2:50444/150‑1 (MQ=255) aGGNCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACt > 2:697595/1‑150 (MQ=255) aGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACt < 1:489735/150‑1 (MQ=255) cGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCgcggctggtcgccctttggtactgcgccggccaagt > 2:169333‑M1/1‑92 (MQ=255) cGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCgcggctggtcgccctttggtactgcgccggccaagt < 1:169333‑M1/128‑37 (MQ=255) aTCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTaa < 1:451459/150‑1 (MQ=255) aTCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTaa < 1:697595/150‑1 (MQ=255) aTCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTaa < 1:499440/150‑1 (MQ=255) cTTCCGGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGc < 1:373729/150‑1 (MQ=255) ggAGCTGCTGCGCGATCCTTACTGGACGCTGCATGCCTATGATGATCTGGGGGGCAACAAGGCCAGTTGGGCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAg > 1:218547/1‑150 (MQ=255) ctgcGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATg > 2:717795/1‑150 (MQ=255) gATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCt < 1:266940/150‑1 (MQ=255) aTCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTg < 1:747227/150‑1 (MQ=255) tGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAGGa < 1:744705/150‑1 (MQ=255) gCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAg > 2:721355/1‑146 (MQ=255) gCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAg < 1:721355/146‑1 (MQ=255) gatgatgatCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAGGCTGTCACTTACCCAtt > 1:473034/1‑150 (MQ=255) atgatgatCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAGGATGTCACTTACCCATTg < 1:12633/150‑1 (MQ=255) tgatgatCTGGGTGGCAACAAGGACCGCCGTCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAGGATGTCACTTACCCATTgg < 1:279962/150‑1 (MQ=255) tCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGa > 1:893020/1‑124 (MQ=255) tCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGa < 2:893020/124‑1 (MQ=255) gggTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAGGATGTCACTTACCCATTGGTTAATGctc > 2:201311/1‑150 (MQ=255) tGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAGGATGTCACTTACCCATTGGTTAATGCTCttt > 2:496342/1‑150 (MQ=255) cACTTGGCCGGCGCGGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAGGATGTCACTTACCCATTGGTTAATGCGCTTTTCCGCCAGTTCg > 2:565966/1‑150 (MQ=255) cACTTGGCCGGCGCAGTACCAAAGGGTGACCAGCCGCgccaagtggccttgttgccacccagatcatcatcggcatgcagcggccagtaaggatcgcgcagcagctcccgagccaggaagatcacgtcggcctgcccggtacgcagaatg < 1:837953‑M2/150‑114 (MQ=255) cACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGc > 2:692265/1‑88 (MQ=255) cACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGc < 1:692265/88‑1 (MQ=255) aCTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCgccaagtggccttgttgccacccagatcatcatcggcatgcagcggccagtaaggatcgcgcagcagctcccgagccaggaagatcacgtcg > 2:169333‑M2/1‑36 (MQ=255) aCTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCgccaagtggccttgttgccacccagatcatcatcggcatgcagcggccagtaaggatcgcgcagcagctcccgagccaggaagatcacgtcg < 1:169333‑M2/128‑93 (MQ=255) aCTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAGGATGTCACTTACCCATTGGTTAATGCTCTTTTCCGCCAGTTCgg > 1:258904/1‑150 (MQ=255) cTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAGGATGTCACTTACCCATTGGTTAATGCTCTTTTCCGCCAGTTCGGc < 1:491465/150‑1 (MQ=255) ttGGCgcggctggtcgccctttggtactgcgccggccaagtggccttgttgccacccagatcatcatcggcatgcagcggccagtaaggatcgcgcagcagctcccgagccaggaagatcacgtcggcctgcccggtacgcagaatgtgc > 1:777891‑M1/1‑5 (MQ=255) | ATGATCACTGAACCTGCCCAGGCCGAGCACATTCTGCGTACCGGGCAGGCCGACGTGATCTTCCTGGCTCGGGAGCTGCTGCGCGATCCTTACTGGCCGCTGCATGCCGATGATGATCTGGGTGGCAACAAGGCCACTTGGCCGGCGCAGTACCAAAGGGCGACCAGCCGCGCCAATCCGATACATGAGTCGGACTTGCGGGATTAAGCTACTGCATTCAGCTGAATGCGGCCTGGCTGAGGATGTCACTTACCCATTGGTTAATGCTCTTTTCCGCCAGTTCGGCT > NC_002947/1684364‑1684650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |