New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2683380 = | 44 (1.020) | 3 (0.080) | 3/220 | NT | 7.5% | intergenic (+13/+100) | prpE/PP_2352 | propionyl‑CoA synthetase/hypothetical protein |
? | NC_002947 | 2683465 = | 36 (0.960) | intergenic (+98/+15) | prpE/PP_2352 | propionyl‑CoA synthetase/hypothetical protein |
GTTCCGGCAAGATTCTGCGGGCGGTGCTGCGCAAGATTGCCGATGGGCAGGATTATGTGCCGCCGTCGACCCTGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCA > NC_002947/2683231‑2683529 | atgtgctgtatgaccaggatcgacgggtgattgtcataggtaaacgtccgctggaagagagcctgggcggcccgctggccgacctgatgcgtacccgcagccggttggggcaactgcaccagattgccccctgagcctgcagtgcctgag < 2:615475‑M1/1‑1 (MQ=255) ttCCGGCAAGATTCTGCGGGCGGTGCTGCGCAAGATTGCCGATGGGCAGGATTATGTGCCGCCGTCGACCGGGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGa > 1:629191/1‑150 (MQ=255) ttCCGGCAAGATTCTGCGGGCGGTGCTGCGCAAGATTGCCGATGGGCAGGATTATGTGCCGCCGTCGACCCTGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGa > 1:838255/1‑150 (MQ=255) ttCCGGCAAGATTCTGCGGGCGGTGCTGCGCAAGATTGCCGATGGGCAAGATTACGTGACGTCGAAGCGCTTTGTTGCCCCGGCAGTGCTTGCGGCGATCGACGCGGTGCTGGCAGAGTTGCCCAGGGCGGGTTGATGGTTTGACCTCGa < 1:252364/150‑1 (MQ=255) gtgctgtatgaccaggatcgacgggtgattgtcataggtaaacgtccgctggaagagagcctgggcggcccgctggccgacctgatgcgtacccgcagccggttggggcaactgcaccagattgccccctgagcctgcagtgcctgaGAt < 2:983939‑M1/3‑1 (MQ=255) tgctgtatgaccaggatcgacgggtgattgtcataggtaaacgtccgctgaaagagagcctgggcggcccgctggccgacctgatgcgtacccgcagccggttggggcaactgcaccagattgccccatgagcctgcagtgccggaGATg > 2:515540‑M1/147‑150 (MQ=255) ggCAAGATTCTGCGGGCGGTGCTGCGCAAGATTGCCGATGGGCAGGATTATGTGCCGCCGTCGACCCTGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGc > 1:431036/1‑150 (MQ=255) ggagatcgacgggtgattgtcataggtaaacgtccgctggaagagagcctgggcggcccgctggccgacctgatgcgtacccgcagccggttggggcaactgcaccagattgccccctgagcctgcagtgcctgaGATGGCCCTTTcgcg < 2:663410‑M1/15‑1 (MQ=255) caggatcgacgggtgattgtcataggtaaacgtccgctggaagagagcctgggcggcccgctggccgacctgatgcgtacccgcagccggttggggcaactgcaccagattgccccctgagcctgcagtgcctgaGATGGCCCTTTcgcg < 2:711709‑M1/15‑1 (MQ=255) cTGCGGGCGGTGCTGCGCAAGATTGCCGATGGGCAGGATTATGTGCCGCCGTCGACCCTGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTcgcg < 2:431036/150‑1 (MQ=255) acgATTGCCGATGGGCAGGATTATGTGCCGCCGTCGACCCTGGATGACCCGGTAGCGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCggg > 2:155470/3‑149 (MQ=255) aGATTGCCGATGGGCAGGATTATGTGCCGCCGTCGACCCTGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCggtg < 1:434386/150‑1 (MQ=255) gATTGCCGATGGGCAGGATTATGTGCCGCCGTCGACCCTGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCggtgc < 2:449152/150‑2 (MQ=255) gCCGATGGGCAGGATTATGTGCCGCCGTCGACCCTGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCg > 2:864759/1‑150 (MQ=255) cGATGGGCAGGATTATGTGCCGCCGTCGACCCTGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGAGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGACCGTGCGCGGGCGGCACGCGCATCGGTGGTTCGGc > 2:640277/1‑150 (MQ=255) cgccgTCGACCCTTGATGACCCGGCAGTGCTTGGGGAGATCGAAGCGGAGCTGGTAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGGCGTGTAGGAGc > 2:48156/1‑150 (MQ=255) gACCCTGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTa < 2:838255/150‑1 (MQ=255) ccTGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTAccc > 1:638351/1‑150 (MQ=255) tGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTCACCCGCGaaa > 2:286527/1‑150 (MQ=255) ggccgacctgatgcgtacccgcagccggttggggcaactgcaccagattgccccctgagcctgcagtgcctgaGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGaaa > 2:217347‑M1/74‑150 (MQ=255) gccgacctgatgcgtacccgcagccggttggggcaactgcaccagattgccccctgagcctgcagtgcctgaGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAg > 1:263772‑M1/73‑150 (MQ=255) ccgacctgatgcgtacccgcagccggttggggcaactgcaccagattgccccctgagcctgcagtgcctgaGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGTGTTTACCCGCGAAAgg > 1:393080‑M1/72‑150 (MQ=255) cccGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCaga < 2:688013/114‑1 (MQ=255) cccGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAggg > 1:711709/1‑150 (MQ=255) cccGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGCCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCaga > 1:688013/1‑114 (MQ=255) ccGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGc > 1:1060529/1‑150 (MQ=255) gtGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAgg < 2:1080171/149‑1 (MQ=255) cTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAgg < 2:1060529/150‑1 (MQ=255) tGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTAAGGc > 1:1115137/1‑150 (MQ=255) ggAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACtt > 1:1035774/1‑149 (MQ=255) ggAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTg > 1:663410/1‑150 (MQ=255) aGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAg < 1:864759/150‑1 (MQ=255) gCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAgg < 2:422862/150‑1 (MQ=255) gCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGCTGGTTCGGCAGACGACGGCGTGTAGGAGCGGTGTTATCCGCCAAAGGCCCATCTCCGGCACTGCAGGCTCAgg > 2:945591/1‑150 (MQ=255) ggTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAgggg < 2:558612/150‑1 (MQ=255) gTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAggggg < 2:1035774/150‑1 (MQ=255) gCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCt > 1:863329/1‑150 (MQ=255) gCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCt > 1:615475/1‑150 (MQ=255) gATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGt < 2:629191/150‑1 (MQ=255) gATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGt < 1:174947/150‑1 (MQ=255) aTTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTg > 1:710196/1‑150 (MQ=255) ccAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGcc > 1:760541/1‑108 (MQ=255) ccAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGcc < 2:760541/108‑1 (MQ=255) ccAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAgggg > 2:19059/1‑133 (MQ=255) ccAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAgggg < 1:19059/133‑1 (MQ=255) ccAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTg > 2:1031775/1‑150 (MQ=255) cggggCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGc < 1:731697/148‑1 (MQ=255) cAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGc < 2:638351/150‑1 (MQ=255) gTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGc > 1:797339/1‑142 (MQ=255) gTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGc < 2:797339/142‑1 (MQ=255) gATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTAcc < 2:352006/84‑1 (MQ=255) gATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTAcc > 1:352006/1‑84 (MQ=255) aTGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGt < 2:782831/130‑1 (MQ=255) aTGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGt > 1:782831/1‑130 (MQ=255) gTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCgg < 1:1087226/150‑1 (MQ=255) aCCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGc < 2:910553/96‑1 (MQ=255) aCCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGc > 1:910553/1‑96 (MQ=255) cTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAg > 2:645792/1‑92 (MQ=255) cTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAg < 1:645792/92‑1 (MQ=255) GATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCa > 2:507618‑M1/1‑150 (MQ=255) | GTTCCGGCAAGATTCTGCGGGCGGTGCTGCGCAAGATTGCCGATGGGCAGGATTATGTGCCGCCGTCGACCCTGGATGACCCGGCAGTGCTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCA > NC_002947/2683231‑2683529 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |