| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2871116 = | 34 (0.780) | 4 (0.100) | 4/242 | NT | 11.4% | intergenic (+380/‑150) | PP_2522/PP_2524 | transposase/HD domain‑containing protein |
| ? | NC_002947 | 2871157 = | 30 (0.730) | intergenic (+421/‑109) | PP_2522/PP_2524 | transposase/HD domain‑containing protein | |||||
TATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCG > NC_002947/2870971‑2871246 | tataCCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCa < 1:1107618/150‑1 (MQ=255) ataCCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAg < 2:478657/150‑1 (MQ=255) ccAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATCTCTTTCCCCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGACGACATGTGTTGTCAGTaa > 1:78562/1‑150 (MQ=255) gccgtggcGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCACGCCA‑GCGCTGACGGGGGGGTTTGACCCCGGAAACTAATAGGCAGAAGACATCCCTTGTCAGCAACATCCCCa > 1:861019/1‑150 (MQ=255) cGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAgg < 2:378517/150‑1 (MQ=255) gCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCt < 1:47154/150‑1 (MQ=255) gggTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGt < 2:532260/150‑1 (MQ=255) ccATTTTCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAgg > 1:985154/1‑115 (MQ=255) ccATTTTCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAgg < 2:985154/115‑1 (MQ=255) cATTTTCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGa < 2:78562/150‑1 (MQ=255) cATTTTCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGa < 1:37045/150‑1 (MQ=255) ttttCTGATATCTCGCACCTGCTGTCC‑GCAAGGTGCTGTCGGTATACTGACTTCCCATCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACa < 2:29452/150‑1 (MQ=255) tCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCa > 1:792008/1‑121 (MQ=255) tCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCa < 2:792008/121‑1 (MQ=255) cTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCa > 2:810081/1‑150 (MQ=255) tGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTAGCCCGTTCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAg < 1:346229/150‑1 (MQ=255) gttcacgggcgccgtccggacactgcctgggcaagtacagagagcctgcatgtcggtttcaacgcctgtacagcacTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGt < 1:195706‑M1/43‑1 (MQ=255) gttcacgggcgccgtccggacactgcctgggcaagtacagagagcctgcatgtcggtttcaacgcctgtacagcacTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGt > 2:195706‑M1/77‑119 (MQ=255) tctcGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACaa > 1:419164/1‑100 (MQ=255) tctcGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACaa < 2:419164/100‑1 (MQ=255) tcGCACCTGCTGTGA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGGCTTGTTTTTTTATCAGTAACATCCCCATCGCACACAAGGATGCTAATGTTAGCGCTGTACAGGCGTTGAAACCGACATGCAGGctctct < 1:810081/150‑1 (MQ=255) caccttgctgACA‑GC‑AGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGtt < 2:337913/120‑1 (MQ=255) caccttgctgACA‑GC‑AGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGtt > 1:337913/6‑125 (MQ=255) gctgTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCCTCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGc < 2:183105/150‑1 (MQ=255) gTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGAc < 2:404496/150‑1 (MQ=255) gagagcctgcatgtcggtttcaacgcctgtacagcacTGGCAGTAACATCCCCATCGCACACAAgg > 2:859674‑M1/38‑66 (MQ=255) gagagcctgcatgtcggtttcaacgcctgtacagcacTGGCAGTAACATCCCCATCGCACACAAgg < 1:859674‑M1/29‑1 (MQ=255) tcACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTg > 2:828106/1‑120 (MQ=255) tcACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTg < 1:828106/120‑1 (MQ=255) tcACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGaa > 1:601141/1‑150 (MQ=255) tcACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGaa < 1:385598/150‑1 (MQ=255) cccAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGt < 1:46744/73‑1 (MQ=255) cccAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGt > 2:46744/1‑73 (MQ=255) cccAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCcg > 1:954137/1‑150 (MQ=255) cccATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCa > 1:223109/1‑150 (MQ=255) ccATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCAc > 2:197309/1‑150 (MQ=255) cATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCAcc > 2:46361/1‑150 (MQ=255) tGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGAc < 1:875799/79‑1 (MQ=255) tGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGAc > 2:875799/1‑79 (MQ=255) gCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCt > 1:908267/1‑50 (MQ=255) gCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCt < 2:908267/50‑1 (MQ=255) cTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCg < 2:807399/133‑1 (MQ=255) cTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCg > 1:807399/1‑133 (MQ=255) | TATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCA‑GCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCG > NC_002947/2870971‑2871246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |