New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3619529 =	31 (0.720)	3 (0.070)	3/240	NT	8.9%	coding (867/948 nt)	PP_3190	ornithine cyclodeaminase/mu‑crystallin family protein
	?	NC_002947	3619568 =	32 (0.780)					coding (828/948 nt)	PP_3190	ornithine cyclodeaminase/mu‑crystallin family protein

AATGGCAAGGTGCTGATGCAGCGCACGCCAGCGCAGGTGCAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTC  >  NC_002947/3619381‑3619678                                                                                                                                                     |                                                                                                                                                      aaTGGCAAGGTGCTGATGCAGCGCACGCCAGCGCAGGTGCAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCt                                                                                                                                                      >  2:1077846/1‑150 (MQ=255)   agcaggaactggacccggcactggtggcaagggcggaccgcatcatcgtcgacgccatcgcccagtgcagccagtacggcgaagtggcccatgccctcggctgtggccgcatcgacgctaaccagctgatcgagctgggtacgctgctgg                                                                                                                                                    >  1:146704‑M1/147‑150 (MQ=255)      aggaactggacccggcactggtggcaagggcggaccgcatcatcgtcgacgccatcgcccagtgcagccagtacggcgaagtggcccatgccctcggctgtggccgcatcgacgctaaccagctgatcgagctgggtacgctgctggctg                                                                                                                                                 >  2:559012‑M1/144‑150 (MQ=255)      aggaactggacccggcactggtggcaagggcggaccgcatcatcgtcgacgccatcgcccagtgcagccagtaaggcgaagtggcccatgtcttggggtggggctgcatcgacgctaaccagctgatcgagctgggtacgctgctggctg                                                                                                                                                 >  1:982111‑M1/144‑150 (MQ=255)        aGGTGCTGATGCAGCGCACGCCAGCGCAGGTGCAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTc                                                                                                                                               <  1:1077846/150‑1 (MQ=255)           tGCTGATGCAGCGCACGCCAGCGCAGGTGCAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTg                                                                                                                                            <  1:175372/150‑1 (MQ=255)                    aGCGCACGCCAGCGCAGGTGCAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGccc                                                                                                                                   >  2:258186/1‑150 (MQ=255)                        cACGCCAGCGCAGGTGCAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGGAATCTGGCTGTCGTGCTCACGCCCCTTg                                                                                                                               >  2:933280/1‑150 (MQ=255)                             cAGCGCAGGTGCAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAATGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACg                                                                                                                          <  2:821273/150‑1 (MQ=255)                                   aGGTGCAACGTTTGCGCTGACGCTGTTGTGGCCGGGGTTGCACAGAGCGGCCCCGGATAGACTTTGCAGCAGATCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGgccagc                                                                                                                    <  1:569878/150‑1 (MQ=255)                                        cAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCcagca                                                                                                               >  2:1046683/1‑150 (MQ=255)                                          gcatcatcgtcgacgccatcgcccagtgcagccagcacggcgaagtggcccatgccctcggctgtggccgcatcgacgctaaccagctgatcgagctgggtacgctgCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCagcagc                                                                                                             >  2:312139‑M1/108‑150 (MQ=255)                                               tGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTAcc                                                                                                        <  1:1028274/150‑1 (MQ=255)                                                  gcTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAg                                                                                                     >  1:609960/1‑150 (MQ=255)                                                     gACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTgg                                                                                                                                                    >  2:677965/1‑100 (MQ=255)                                                     gACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTgg                                                                                                                                                    <  1:677965/100‑1 (MQ=255)                                                        gccatcgcccagtgcagccagtacggcgaagtggcccatgccctcggctgtggccgcatcgacgctaaccagctgatcgagctgggtacgctgCTGGCTGTCGTGCTCACGCCCCTTGGCACGgcca                                                                                                                      <  1:142187‑M1/34‑1 (MQ=255)                                                        gccatcgcccagtgcagccagtacggcgaagtggcccatgccctcggctgtggccgcatcgacgctaaccagctgatcgagctgggtacgctgCTGGCTGTCGTGCTCACGCCCCTTGGCACGgcca                                                                                                                      >  2:142187‑M1/94‑127 (MQ=255)                                                        gCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCagcagc                                                                                                             >  1:352149/1‑136 (MQ=255)                                                        gCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCagcagc                                                                                                             <  2:352149/136‑1 (MQ=255)                                                         cTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGGATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATc                                                                                              <  1:1039128/150‑1 (MQ=255)                                                            ttgttgCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGc                                                                                           <  1:650784/150‑1 (MQ=255)                                                                 gCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGtt                                                                                      <  2:82681/150‑1 (MQ=255)                                                                  ccTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTa                                                                                     >  2:142555/1‑150 (MQ=255)                                                                      aGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGt                                                                                 <  2:609960/150‑1 (MQ=255)                                                                         tGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGa                                                                              <  1:142555/150‑1 (MQ=255)                                                                               gggCGGCCAAGGCGTGGCTTGCGACCTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGc                                                                        >  2:1129971/1‑150 (MQ=255)                                                                                       aaGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCt                                                                                                                                                  >  1:32651/1‑68 (MQ=255)                                                                                       aaGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCt                                                                                                                                                  <  2:32651/68‑1 (MQ=255)                                                                                          gCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAgg                                                             >  1:444757/1‑150 (MQ=255)                                                                                                 ttGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATggg                                                      >  2:175420/1‑150 (MQ=255)                                                                                                 ttGCGACTTGTGCATCCTGCACTGCAACACCAGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATggg                                                      >  2:770246/1‑150 (MQ=255)                                                                                                    cGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCa                                                   >  1:858009/1‑150 (MQ=255)                                                                                                     gACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCAc                                                  >  2:622314/1‑150 (MQ=255)                                                                                                          gtgCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGc                                             <  1:258186/150‑1 (MQ=255)                                                                                                                 ctgcactgcaACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAgg                                                             <  1:271468/127‑1 (MQ=255)                                                                                                                 ctgcactgcaACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTAACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAgg                                                             >  2:271468/1‑127 (MQ=255)                                                                                                                  tgcactgcaACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCTAGGGCATGGGCCACTTCGCCGTACTgg                                     >  2:589777/1‑150 (MQ=255)                                                                                                                  tgcactgcaACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTgg                                     >  2:234791/1‑150 (MQ=255)                                                                                                                                ggTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCAAGTCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGAt                       <  1:673706/150‑1 (MQ=255)                                                                                                                                                gTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGatgatg       <  1:1129971/150‑1 (MQ=255)                                                                                                                                                gTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGatgatg       <  1:604882/150‑1 (MQ=255)                                                                                                                                                gTAATCTGGCTGGCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGatgatg       <  2:209433/150‑1 (MQ=255)                                                                                                                                                    tCTGGCTGTGGTGCGCCCGCCACTGGGCACGGCAAGCCAGCGGCGTCCCCAGCTCGATCAGCTGGTTAGCGTCGCTGCGGCCACGGCCGCGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGt   <  2:139356/150‑1 (MQ=255)                                                                                                                                                     CTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTc  >  2:858009‑M1/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                      AATGGCAAGGTGCTGATGCAGCGCACGCCAGCGCAGGTGCAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTC  >  NC_002947/3619381‑3619678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.