New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3708303	36 (0.830)	4 (0.100)	4/238	NT	9.3%	coding (614/1563 nt)	actP‑III	acetate permease
	?	NC_002947	= 3708336	44 (1.080)					coding (581/1563 nt)	actP‑III	acetate permease

GCATCAGGATATGCGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATC  >  NC_002947/3708157‑3708452                                                                                                                                                   |                                                                                                                                                      gcATCAGGATATGCGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCgg                                                                                                                                                    >  1:144191/1‑150 (MQ=255)   aTCAGGATATGCGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTg                                                                                                                                                  >  1:788178/1‑150 (MQ=255)   aTCAGGATATGCGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTg                                                                                                                                                  >  1:788089/1‑150 (MQ=255)               ggCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAg                                                                                                                                      <  2:1107180/150‑1 (MQ=255)                    gCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCtt                                                                                                                                 <  2:150821/150‑1 (MQ=255)                     ccAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACAGGGCCTCGATGCTGAAGCCGAAGGTCTTg                                                                                                                                >  2:868683/1‑150 (MQ=255)                          ggTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCcggtgctcaagcacttcggcttcagcac                                                                                                                            <  2:252532‑M1/150‑29 (MQ=255)                             gCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCAt                                                                                                                        <  2:293540/150‑1 (MQ=255)                                          cccAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTtcatggtgctcaagcacttcggcttcagcaccgaggccatgttt                                                                                                           <  1:1073472‑M1/150‑45 (MQ=255)                                           ccAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAAc                                                                                                          >  1:955004/1‑150 (MQ=255)                                               aCCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGt                                                                                                      >  2:1109771/1‑150 (MQ=255)                                                        aaTGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGAAATCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATag                                                                                             <  1:620398/150‑1 (MQ=255)                                                          tGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATagca                                                                                           <  2:1096844/150‑1 (MQ=255)                                                                   ccGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTtcatggtgctcaagcacttcggctt                                                                                                                              >  2:353169‑M1/1‑81 (MQ=255)                                                                   ccGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTtcatggtgctcaagcacttcggctt                                                                                                                              <  1:353169‑M1/106‑26 (MQ=255)                                                                           gACNACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTtgatg                                                                          >  2:703935/1‑150 (MQ=255)                                                                              aacaaGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATc                                                                       >  1:584175/1‑150 (MQ=255)                                                                                caaGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTg                                                                     >  1:388568/1‑150 (MQ=255)                                                                                   gccgccTGGGGCCATGCTCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAGGCCGAAGTGCTTGAGCACCATGAACGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCAc                                                                  >  2:17735/1‑150 (MQ=255)                                                                                       ccTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATagca                                                                                           >  1:545248/1‑121 (MQ=255)                                                                                       ccTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATagca                                                                                           <  2:545248/121‑1 (MQ=255)                                                                                       ccTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAg                                                              <  2:960013/150‑1 (MQ=255)                                                                                       ccTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAg                                                              >  1:70536/1‑150 (MQ=255)                                                                                             gCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGgtggtg                                                        >  1:402845/1‑150 (MQ=255)                                                                                              ccATGATCGCCTGGCCCTTGGCATGCCCAGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGtggtgg                                                       >  1:759834/1‑150 (MQ=255)                                                                                                 tGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGa                                                    <  1:531124/150‑1 (MQ=255)                                                                                                   aTCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCa                                                                   <  2:105667/133‑1 (MQ=255)                                                                                                   aTCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCa                                                                   >  1:105667/1‑133 (MQ=255)                                                                                                    tCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGTCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCa                                                 >  2:1115249/1‑150 (MQ=255)                                                                                                           gCCCTTGGCATGCACGGCCACCGCACTGTCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCAcc                                          <  1:1115249/150‑1 (MQ=255)                                                                                                           gCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCAcc                                          >  2:658773/1‑150 (MQ=255)                                                                                                             ccTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGa                                        >  1:626066/1‑150 (MQ=255)                                                                                                                 ggCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGt                                    <  2:626066/150‑1 (MQ=255)                                                                                                                  gCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTg                                   <  2:994158/150‑1 (MQ=255)                                                                                                                   cATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGa                                  >  2:610595/1‑150 (MQ=255)                                                                                                                       cACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTg                                                                     >  2:496283/1‑111 (MQ=255)                                                                                                                       cACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTg                                                                     <  1:496283/111‑1 (MQ=255)                                                                                                                       cACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATa                              <  2:413174/150‑1 (MQ=255)                                                                                                                                  cACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCa                   <  2:402845/150‑1 (MQ=255)                                                                                                                                     tGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCa                >  2:784376/1‑150 (MQ=255)                                                                                                                                      ggCAAACATGCCCTCGGTGCTGAAGCCGAAGTGATTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCAc               <  1:500101/150‑1 (MQ=255)                                                                                                                                         aaaCATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAaggccatgtttgccagtgcggtggccgtgcatgccaagggccaggcgatcatggccccaggcggcttgttgtccaacccggtggacgccatttccctcggtttggg            <  1:1073472‑M2/150‑107 (MQ=255)                                                                                                                                              tGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCa       <  1:610595/150‑1 (MQ=255)                                                                                                                                              tGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCa       <  2:70536/150‑1 (MQ=255)                                                                                                                                                   tCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATc  >  2:118920/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                      GCATCAGGATATGCGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTCGGTGCTGAAGCCGAAGTGCTTGAGCACCATGAAGGCCATGAAACTGGTGCCTGATAGCAGCATTACCGCCTTGATGATCTGCACCCAGGTGGTGGCGAGCATGCCACCGAAGGTGACATAGGAAACCATCAGCACCCCGACCAGCATC  >  NC_002947/3708157‑3708452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.