New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4344193 | 41 (0.950) | 4 (0.100) | 4/242 | NT | 10.4% | coding (1029/1149 nt) | PP_3817 | polyamine ABC transporter ATP‑binding protein |
? | NC_002947 | = 4344219 | 30 (0.730) | coding (1055/1149 nt) | PP_3817 | polyamine ABC transporter ATP‑binding protein |
CCGAACAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCC > NC_002947/4344051‑4344339 | ccGAACAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTcggcggcgg < 2:913212/150‑1 (MQ=255) ccGAACAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTcggcggcgg < 2:623584/150‑1 (MQ=255) aCAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTAGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCAt > 2:599243/1‑150 (MQ=255) aCAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGAACAGTTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCAt < 1:618230/150‑1 (MQ=255) ggCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGcc > 1:675881/1‑150 (MQ=255) gCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCg > 1:368167/1‑150 (MQ=255) ccATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGa < 2:264834/150‑1 (MQ=255) cTGCCGGCGGGTTGGACCGAGGTCACTGCCAACGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgac > 1:72264‑M2/1‑146 (MQ=255) tGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgaca < 1:200788‑M2/150‑6 (MQ=255) ggcggGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGt < 1:1021251/150‑1 (MQ=255) ttGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGcccggctgcatcggcatgcccgccgccgacagt > 2:778086‑M1/1‑109 (MQ=255) ttGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGcccggctgcatcggcatgcccgccgccgacagt < 1:778086‑M1/142‑34 (MQ=255) ttGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGt < 2:200788/150‑1 (MQ=255) ggAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGc < 2:198479/150‑1 (MQ=255) aaCGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGcccggctgcatcggcatgcccgccgccgaca > 2:691848‑M1/1‑105 (MQ=255) aaCGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGcccggctgcatcggcatgcccgccgccgaca < 1:691848‑M1/136‑32 (MQ=255) aaCGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGt > 1:650526/1‑150 (MQ=255) gAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTgg > 1:1000336/1‑150 (MQ=255) aGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTggg < 2:818458/150‑1 (MQ=255) gTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCa > 2:312446/1‑150 (MQ=255) aCTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTg > 2:377682/1‑150 (MQ=255) aCTGCAAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCGGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTg > 2:1066473/1‑150 (MQ=255) tGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGc > 2:723554/1‑150 (MQ=255) gCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGAGCAGTTGCa > 2:357329/1‑150 (MQ=255) ccAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAg > 2:972065/1‑150 (MQ=255) ccAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAg > 2:1071438/1‑150 (MQ=255) cAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGa > 1:162106/1‑150 (MQ=255) ggCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGc < 1:723554/150‑1 (MQ=255) tGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTTACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCg < 1:982261/101‑1 (MQ=255) tGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCg > 2:982261/1‑101 (MQ=255) tGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTtata < 2:555617/150‑1 (MQ=255) tGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTtata < 2:913271/150‑1 (MQ=255) gCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATAc < 2:74771/150‑1 (MQ=255) gCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATAc < 1:377682/150‑1 (MQ=255) tGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATCCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCg > 1:713588/1‑150 (MQ=255) gTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATANCGa < 2:697109/150‑1 (MQ=255) tGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGc > 1:316474/1‑86 (MQ=255) tGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGc < 2:316474/86‑1 (MQ=255) aaGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGagag < 2:675881/150‑1 (MQ=255) ccTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGa < 1:599243/150‑1 (MQ=255) tgtgGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTc < 2:368167/150‑1 (MQ=255) tggtgACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCgg > 2:404277/1‑150 (MQ=255) aCTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCggg < 1:1066473/150‑1 (MQ=255) ggTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTaa < 1:338239/150‑1 (MQ=255) ggTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTaa < 1:287715/150‑1 (MQ=255) gTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAAc < 2:162106/150‑1 (MQ=255) gACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTAc < 2:650526/150‑1 (MQ=255) gTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTG > 2:462752‑M1/1‑150 (MQ=255) ggCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCG > 2:326810‑M1/1‑150 (MQ=255) aCTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgttccaa < 1:778086‑M2/142‑110 (MQ=255) aCTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgttccaa > 2:778086‑M2/1‑33 (MQ=255) tGTCGcccggctgcatcggcatgcccgccgccgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgttccaacccgccggca < 1:200788‑M1/150‑146 (MQ=255) tGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgtt > 2:691848‑M2/1‑31 (MQ=255) tGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgtt < 1:691848‑M2/136‑106 (MQ=255) tGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGGGCGGCCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGC > 1:11916‑M1/1‑150 (MQ=255) ggtCGGCGGCGGGCATGTCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCAGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGC < 2:422165‑M1/149‑1 (MQ=255) gTCGcccggctgcatcggcatgcccgccgccgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaacgttggcagtgacctcggtccaacccgccggcag > 1:72264‑M1/1‑4 (MQ=255) | CCGAACAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCC > NC_002947/4344051‑4344339 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |