| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4647641 | 9 (0.210) | 7 (0.230) | 7/176 | NT | 39.8% | intergenic (+48/+83) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947 | = 4647671 | 15 (0.500) | intergenic (+78/+53) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
CCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGC > NC_002947/4647496‑4647787 | cccAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATgg < 2:105517/150‑1 (MQ=255) ccgggccAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAgg < 1:744688/150‑1 (MQ=255) gggccAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGcc > 2:474029/1‑150 (MQ=255) cAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCaaa < 1:1091653/150‑1 (MQ=255) ctcGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATtgt < 2:244842/150‑1 (MQ=255) gATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTgcg > 1:195555/1‑150 (MQ=255) tCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctg > 2:195555‑M2/1‑146 (MQ=255) cACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTTCAGGATGACAGCCGGCCCAAACAGTGTGCGCCCCcctgt < 1:109850‑M2/150‑6 (MQ=255) aCCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgta < 1:985169‑M1/150‑37 (MQ=255) aCCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgta > 2:527524‑M2/1‑144 (MQ=255) cccGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtag < 1:393621‑M1/150‑38 (MQ=255) tggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGa > 2:855130‑M1/73‑150 (MQ=255) cTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagc < 1:383074‑M1/150‑42 (MQ=255) tATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcg < 2:306413‑M1/150‑43 (MQ=255) gcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCgg > 2:261364‑M1/69‑150 (MQ=255) gcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCgg > 2:194770‑M1/69‑150 (MQ=255) tGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcggg > 1:474029‑M2/1‑136 (MQ=255) gCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggt < 1:286491‑M1/150‑46 (MQ=255) gAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgta > 2:955926‑M2/1‑132 (MQ=255) gAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgta < 1:955926‑M2/138‑7 (MQ=255) cggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTAccc > 1:796173‑M1/61‑150 (MQ=255) gCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATtgt > 1:497677/1‑112 (MQ=255) gCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATtgt < 2:497677/112‑1 (MQ=255) aTTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgg < 1:27711‑M2/130‑14 (MQ=255) aTTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgg > 2:27711‑M2/1‑117 (MQ=255) gagCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAGACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCaa < 1:742482/150‑1 (MQ=255) gCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgt > 1:659129‑M1/1‑48 (MQ=255) gCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgt < 2:659129‑M1/83‑36 (MQ=255) ttCTCCTGGGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGCACCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCtt < 2:109850/150‑1 (MQ=255) TTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCg < 2:461490‑M1/150‑1 (MQ=255) gcgGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtagga > 1:453707‑M2/1‑53 (MQ=255) gcgGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtagga < 2:453707‑M2/62‑10 (MQ=255) GTAAACCCGCTCCTACAGGATGGCCGCCGTCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGAc < 1:578532‑M1/150‑1 (MQ=255) aaaCCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgg < 2:1110814‑M2/60‑14 (MQ=255) aaaCCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgg > 1:1110814‑M2/1‑47 (MQ=255) aCCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggc < 1:286491‑M2/150‑106 (MQ=255) cccGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggca > 1:474029‑M1/1‑14 (MQ=255) CCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACCGCTTCTTGCACCTCTCCGACAAATg < 1:114528‑M1/150‑1 (MQ=255) CCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATg < 1:695978‑M1/150‑1 (MQ=255) ccGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaat > 2:27711‑M1/1‑13 (MQ=255) ccGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaat < 1:27711‑M1/130‑118 (MQ=255) ccGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggttt < 2:1110814‑M1/60‑48 (MQ=255) ccGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggttt > 1:1110814‑M1/1‑13 (MQ=255) CCGCTCCTACAGGATGGCCGCAGGCCCAAACATTTTGCTCCCCCCTGTAGTAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGc < 1:304701‑M1/150‑1 (MQ=255) cGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcata < 2:306413‑M2/150‑109 (MQ=255) gCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatag < 1:383074‑M2/150‑110 (MQ=255) tCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgc < 2:453707‑M1/62‑54 (MQ=255) tCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgc > 1:453707‑M1/1‑9 (MQ=255) cTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcggg < 1:393621‑M2/150‑114 (MQ=255) tACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcgggt > 2:527524‑M1/1‑6 (MQ=255) tACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctc < 1:955926‑M1/138‑133 (MQ=255) tACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctc > 2:955926‑M1/1‑6 (MQ=255) tACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcgggt < 1:985169‑M2/150‑115 (MQ=255) aCAGGggggcgcacactgtttgggccggctgtcatcctgaaggagcgggttcacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcgggtg < 1:109850‑M1/150‑146 (MQ=255) aCAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgc < 2:659129‑M2/83‑49 (MQ=255) aCAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgc > 1:659129‑M2/1‑35 (MQ=255) ACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTGAACAGCTTCTTGCACCGCTCCGACAAATGCACCAcgcg < 1:560094‑M1/150‑1 (MQ=255) ACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCAcgcg < 2:777103‑M1/150‑1 (MQ=255) cAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcgggtga > 2:195555‑M1/1‑4 (MQ=255) | CCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGC > NC_002947/4647496‑4647787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |