New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5698799	41 (0.950)	8 (0.210)	6/220	NT	15.9%	intergenic (+33/‑134)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	= 5698848	49 (1.310)					intergenic (+82/‑85)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein

GACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGC  >  NC_002947/5698656‑5698945                                                                                                                                                |                                                                                                                                                   gACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTTCCAAGATTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGc                                                                                                                                              >  1:57264/1‑150 (MQ=255)         cAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCt                                                                                                                                                <  1:802221/140‑1 (MQ=255)         cAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCt                                                                                                                                                >  2:802221/1‑140 (MQ=255)            cACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcacca                                                                                                                                   >  2:317307‑M1/1‑133 (MQ=255)            cACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGccacca                                                                                                                                   >  2:467689/1‑150 (MQ=255)               ccATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACaa                                                                                                                                >  2:1089539/1‑150 (MQ=255)               ccATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACaa                                                                                                                                >  1:338533/1‑150 (MQ=255)                   gACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCt                                                                                                                            >  1:595546/1‑150 (MQ=255)                      gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTgg                                                                                                                         <  1:1057215/150‑1 (MQ=255)                            ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgt                                                                                                                   <  2:1038498/150‑1 (MQ=255)                            ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCACGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgt                                                                                                                   >  1:650196/1‑150 (MQ=255)                              gATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGAATGCCAGCTCTTGCACGCGCCACCACAACCCTTGGGCCTgtgg                                                                                                                 <  2:680971/150‑1 (MQ=255)                                    gATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCtcccgcacggatcaccacaggcccaagggttgtggtggcgc                                                                                                           <  1:902958‑M1/150‑42 (MQ=255)                                         aCGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGCTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgca                                                                                                      <  2:774361‑M1/150‑47 (MQ=255)                                            cggcgTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcagga                                                                                                   <  2:206328‑M1/150‑50 (MQ=255)                                                gTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgg                                                                                               <  1:388461‑M1/150‑54 (MQ=255)                                                gTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgg                                                                                               <  1:317307‑M1/150‑54 (MQ=255)                                                gTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgg                                                                                               >  1:1072711‑M2/1‑146 (MQ=255)                                                     tgAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcagga                                                                                                   >  2:245329‑M1/1‑92 (MQ=255)                                                     tgAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcagga                                                                                                   <  1:245329‑M1/141‑50 (MQ=255)                                                          aGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgcccgc                                                                                     <  2:589920‑M2/150‑15 (MQ=255)                                                                   ggTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTTTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGcc                                                                            <  1:148767/150‑1 (MQ=255)                                                                          tGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggctt                                                                                           >  2:139799‑M2/1‑120 (MQ=255)                                                                          tGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTGCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggctt                                                                                           <  1:139799‑M2/128‑9 (MQ=255)                                                                              acaGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAAtccct                                                                 >  1:680711/1‑150 (MQ=255)                                                                                  aaCGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTcccc                                                             >  1:604007/1‑150 (MQ=255)                                                                                          ccTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCt                                                     <  2:595546/150‑1 (MQ=255)                                                                                          ccTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCt                                                     <  1:589920/150‑1 (MQ=255)                                                                                           cTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTg                                                    >  2:193298/1‑150 (MQ=255)                                                                                            tGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTgg                                                   <  1:467689/150‑1 (MQ=255)                                                                                            tGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTgg                                                   >  1:3297/1‑150 (MQ=255)                                                                                              tCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGGAGAGGCCCTTTAATCCCTCCCCCATAAGCTGGaa                                                 >  2:336513/1‑150 (MQ=255)                                                                                                 cgTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCt                                              <  2:813145/150‑1 (MQ=255)                                                                                                     aCATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCCATTGTGACCTCAAACATGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGc                                          <  1:193298/150‑1 (MQ=255)                                                                                                        ttCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCt                                                     >  2:435859/1‑136 (MQ=255)                                                                                                        ttCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCt                                                     <  1:435859/136‑1 (MQ=255)                                                                                                        ttCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtc                                       >  1:783599/1‑150 (MQ=255)                                                                                                            gTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGccc                                                                           >  1:197666/1‑110 (MQ=255)                                                                                                            gTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGccc                                                                           <  2:197666/110‑1 (MQ=255)                                                                                                            gTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtcatca                                   >  2:1124863/1‑150 (MQ=255)                                                                                                             tAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAg                                  <  2:338533/150‑1 (MQ=255)                                                                                                                          gACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGGCAGAtt                     >  2:744630/1‑150 (MQ=255)                                                                                                                           aCAGTTTCGCGGGCAAGCCCGCTCCTGCCCGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTc                    >  1:984467/1‑150 (MQ=255)                                                                                                                           aCAGTTTCGCGGGCAAGCCCGCTCCTCCACGCGCCACCACAACCCCTGGGGCCGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGGATCCCCCCCCCCCAAGCTGGGAGCTGTGCCTCATCAGCCCCCGCGAGATTc                    >  2:834170/1‑150 (MQ=255)                                                                                                                              gTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgt                                                                                                                   >  2:740992/1‑52 (MQ=255)                                                                                                                              gTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgt                                                                                                                   <  1:740992/52‑1 (MQ=255)                                                                                                                              gTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGc                 <  1:353911/150‑1 (MQ=255)                                                                                                                               tttCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCCGGCTTGCCCGCGAAGAGGCCCTTGACTCCCTCCCCCATAAGCTGGAAGCTGTCCTTCATCAGCCCCCGCGAGATTCTGcc                >  1:1110544/1‑150 (MQ=255)                                                                                                                               tgtCGCGGCCAAGCCCGCTCCCGACCGCGCCACCACAACCCTTGGGCCTGTGGTGATTCCGGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGcc                <  2:122971/148‑1 (MQ=255)                                                                                                                                   gcgGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggct            <  2:589920‑M1/150‑137 (MQ=255)                                                                                                                                    cgGGCCAGCCCGCCCCTGCACGCGCCACCACCAACCTTGGGCCTGTCGAGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATgg           <  2:57264/150‑1 (MQ=255)                                                                                                                                         aaGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgcaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgcca                            <  1:139799‑M1/128‑121 (MQ=255)                                                                                                                                         aaGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgcca                            >  2:139799‑M1/1‑8 (MQ=255)                                                                                                                                         aaGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGGCGCGTGCAGGAGCGGCCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCCTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgc      >  2:131272/1‑150 (MQ=255)                                                                                                                                         aaGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGccc                                                                           <  1:631251/81‑1 (MQ=255)                                                                                                                                         aaGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGccc                                                                           >  2:631251/1‑81 (MQ=255)                                                                                                                                         aaGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGaa                                                 >  1:635592/1‑107 (MQ=255)                                                                                                                                         aaGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGaa                                                 <  2:635592/107‑1 (MQ=255)                                                                                                                                            cccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGcggtaggc   >  2:887794/1‑143 (MQ=255)                                                                                                                                            cccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcctg   >  1:929696/1‑150 (MQ=255)                                                                                                                                            cccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCCAGAGATTCTGCCCATGGCCCgcctg   >  1:1125906/1‑150 (MQ=255)                                                                                                                                             ccgcccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacatac  >  1:1072711‑M1/1‑4 (MQ=255)                                                                                                                                             ccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacatac  <  1:388461‑M2/150‑98 (MQ=255)                                                                                                                                             ccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacatac  <  1:317307‑M2/150‑98 (MQ=255)                                                                                                                                              cGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCtt                                                                         >  2:562375/1‑78 (MQ=255)                                                                                                                                              cGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCtt                                                                         <  1:562375/78‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                   GACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGC  >  NC_002947/5698656‑5698945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.