New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1537002 | 48 (1.110) | 4 (0.100) | 4/240 | NT | 7.8% | coding (596/633 nt) | PP_1347 | glutathione S‑transferase family protein |
? | NC_002947 | = 1537016 | 49 (1.200) | coding (610/633 nt) | PP_1347 | glutathione S‑transferase family protein |
TGTTCGGCAAGCCAAGCCTGGCCGATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGGAGTTCCCCGGTGGCAAGGTGGAAGAAGGC > NC_002947/1536870‑1537164 | tGTTCGGCAAGCCAAGCCTGGCCGATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGgcc < 2:523033‑M2/150‑4 (MQ=255) tGTTCGGCAAGCCAAGCCTGGCCGATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGgcc < 1:830444‑M2/150‑4 (MQ=255) ttCGGCAAGCCAAGCCTGGCCGATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTCGCAAGATTTTTATGCGTGGCCACCGGCAGgcctg < 2:416314‑M2/150‑6 (MQ=255) cGGCAAGCCAAGCCTGGCCGATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGgcctgga > 1:523033‑M2/1‑143 (MQ=255) caagccaagcCTGGCCGATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTggagga < 2:90654/150‑1 (MQ=255) agccaagccTGGCCGATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGc < 2:102837/150‑1 (MQ=255) agccTGGCCGATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTaaa < 2:831973/150‑1 (MQ=255) agccTGGCCGATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGCCCGGGAGGATCGTaaa < 2:831974/150‑1 (MQ=255) cGATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGaaa > 2:925193/1‑150 (MQ=255) gATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTggagga < 2:707559/134‑1 (MQ=255) gATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTggagga > 1:707559/1‑134 (MQ=255) cttTGCCCCGGTGGCGGTGCGGCTGCGCACCTACCGCGTAGAAGTCCCCGCGGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCAt < 2:85762/150‑1 (MQ=255) tttGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATg > 1:652845/1‑150 (MQ=255) tGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGc < 2:1025070/150‑1 (MQ=255) tGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGAAGGCCTTGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGc < 1:256947/150‑1 (MQ=255) cTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTcgcg < 1:834122/150‑1 (MQ=255) cTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCGGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTcgcg < 2:830444/150‑1 (MQ=255) aCCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATgg < 1:925193/150‑1 (MQ=255) aCCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATgg < 1:1095978/150‑1 (MQ=255) cgcgTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGcc < 2:557995/150‑1 (MQ=255) gcgTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCg > 1:329849/1‑150 (MQ=255) aGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTAtt < 1:710237/150‑1 (MQ=255) aaGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGcc < 2:733622/143‑1 (MQ=255) aaGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGcc > 1:733622/1‑143 (MQ=255) tCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGAt > 1:143978/1‑150 (MQ=255) cccGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGCACCGCGCGCCCCGGCTTCACCTCGTAGCGCCCGCCATCCGCGGCCCTCCTGGCCGTATTccccccc > 1:661159/1‑144 (MQ=255) ccGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGc > 2:63653/1‑150 (MQ=255) ccGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGc > 1:461167/1‑150 (MQ=255) gCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCAc > 1:698355/1‑150 (MQ=255) cggcATCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGc < 1:86380/150‑1 (MQ=255) cggcAGCCTACATCGAGACCATTTATCTGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGc < 2:927074/150‑1 (MQ=255) ggcAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGcc < 1:49289/150‑1 (MQ=255) gcAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCCTGAAACGGATTCATGTAGTCGAGACCGTCAAGAACAGAGCTGAGGGCCGTATTCTGATCGCACGCCGTGCCg > 1:518987/1‑150 (MQ=255) cTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATAcc > 2:420320/1‑150 (MQ=255) tCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCAt < 1:773474/82‑1 (MQ=255) tCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCAt > 2:773474/1‑82 (MQ=255) cATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAAc < 1:469858/67‑1 (MQ=255) cATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAAc > 2:469858/1‑67 (MQ=255) tttATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGggcgg > 2:1115143/1‑150 (MQ=255) tATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCCCCAGGGCGGCt < 2:461167/150‑1 (MQ=255) tCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTtg > 1:463291/1‑150 (MQ=255) gTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTgg > 1:447353/1‑150 (MQ=255) gTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCAGTGCTGATGCCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTgg > 2:375029/1‑150 (MQ=255) ggCCAGCCTAACAGGCATGCAAAAAGGCACGACTGAAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGGa < 2:232920/150‑1 (MQ=255) ccAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCTCCAGGGCGGCTTGTGGGAGt < 1:562871/150‑1 (MQ=255) cAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTgg < 2:411557/145‑1 (MQ=255) cAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTgg > 1:411557/1‑145 (MQ=255) ccTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGGAGTTccc < 2:691215/150‑1 (MQ=255) ttCCAGGCATGGCAACAGGCAGgcctggaaggctggccactgataaatggtctcgatgtaggctgccgcctcagcggggacttctacg > 2:349379‑M2/1‑22 (MQ=255) ttCCAGGCATGGCAACAGGCAGgcctggaaggctggccactgataaatggtctcgatgtaggctgccgcctcagcggggacttctacg < 1:349379‑M2/88‑67 (MQ=255) ccAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGGAGTTCCCCGGt < 2:329849/150‑1 (MQ=255) aGGCATGGCAACAGGCAGgcctggaaggctggccactgataaatggtctcgatgtaggctgccgcctcagcggg < 1:119584‑M2/74‑57 (MQ=255) aGGCATGGCAACAGGCAGgcctggaaggctggccactgataaatggtctcgatgtaggctgccgcctcagcggg > 2:119584‑M2/1‑18 (MQ=255) aTGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGGGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGGAGGTCCCCGGGGGCAAg > 1:403979/1‑150 (MQ=255) gCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAACCGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGGAGTTCCCCGGTGGCAAGGTg < 2:412925/150‑1 (MQ=255) gCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGGAGTTCCCCGGTGGCAAGGTg > 2:167923/1‑150 (MQ=255) aaCAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAg < 1:900697/109‑1 (MQ=255) aaCAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAg > 2:900697/1‑109 (MQ=255) aaCAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGCAGTTCCCCGGTGGCAAGGTGga < 2:652845/150‑1 (MQ=255) aggcaggcCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAg > 1:930112/1‑112 (MQ=255) aggcaggcCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAg < 2:930112/112‑1 (MQ=255) gcaggcCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGGAGTTCCCCGGTGGCAAGGTGGaagaag > 2:818435/1‑150 (MQ=255) gcaggcCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGGAGTTCCCCGGTGGCAAGGTGGaagaag < 1:557587/150‑1 (MQ=255) aggcCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTACTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGGAGTTCCCCGGTGGCAAGGTGGAAGAAGGc < 1:411762/150‑1 (MQ=255) | TGTTCGGCAAGCCAAGCCTGGCCGATGCCTTCTTTGCCCCGGTGGCGGTGCGCCTGCGCACCTACCGCGTAGAAGTCCCCGCTGAGGCGGCAGCCTACATCGAGACCATTTATCAGTGGCCAGCCTTCCAGGCATGGCAACAGGCAGGCCTGGAGGAGCGTAAAGCGTGAAACGGATTCATGTAGTAGCGGCCGTCATTCGCGGTGCTGATGGCCGTATTCTGATCGCACGCCGTGCCGATACCCAGCACCAGGGCGGCTTGTGGGAGTTCCCCGGTGGCAAGGTGGAAGAAGGC > NC_002947/1536870‑1537164 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |