New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1832840 =	48 (1.110)	3 (0.070)	3/244	NT	6.2%	coding (63/366 nt)	dgkA‑I	diacylglycerol kinase
	?	NC_002947	1832890 =	44 (1.060)					coding (113/366 nt)	dgkA‑I	diacylglycerol kinase

CTGGCCTTTCTGCTGTGAAGTGACTCACATGACATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGCTGTTCAACTCGGCGGTGGAGGCGGCCATCGATCGCA  >  NC_002947/1832750‑1833033                                                                                                                                             |                                                                                                                                                ctgGCCTTTCTGCTGTGAAGTGACTCACATGACATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGTCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTgctgct                                                                                                                                        >  1:181726/1‑150 (MQ=255)    gCCTTTCTGCTGTGAAGTGACTCACATGACATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCaa                                                                                                                                     >  2:9502/1‑150 (MQ=255)           tgctgTGAAGTGACTCACATGACATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGtgctg                                                                                                                              >  2:647656/1‑150 (MQ=255)              tgtgAAGTGACTCACATGACATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTAGAGAGCCTGCGTGCCGCCTTCAAGGGCGAGGCAGCATTACGCCAGCTGGTGCTGCTCAACGTGctgctg                                                                                                                           >  1:466030/1‑150 (MQ=255)               gtgAAGTGACTCACATGACATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTGAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTATAGGACTAAAAATCTAGGCCGCGTTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGa                                                                                                                          >  2:578355/1‑150 (MQ=255)                  aaGTGACTCACTTGACATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCCCCGCACGTCCTGCGTGCCGACTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATcc                                                                                                                       <  2:587293/150‑1 (MQ=255)                  aaGTGACTCACATGACATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATcc                                                                                                                       >  1:973685/1‑150 (MQ=255)                  aaGTGACTCACATGACATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATcc                                                                                                                       <  1:9502/150‑1 (MQ=255)                       aCTCACATGACATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATc                                                                                                                  <  1:217007/150‑1 (MQ=255)                             aTGACATCGCCATTCAAGGGCCAGACCGGCCTCAATCGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTc                                                                                                            <  2:808967/150‑1 (MQ=255)                                aCATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTgg                                                                                                         <  2:537804/150‑1 (MQ=255)                                 cATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGc                                                                                                        <  1:278480/150‑1 (MQ=255)                                 cATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGc                                                                                                        <  1:123894/150‑1 (MQ=255)                                  aTCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCt                                                                                                       >  1:509753/1‑150 (MQ=255)                                  aTCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCt                                                                                                       >  1:896370/1‑150 (MQ=255)                                   tCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTg                                                                                                      >  2:421391/1‑150 (MQ=255)                                      ccATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCg                                                                                                   >  2:1056485/1‑150 (MQ=255)                                        aTTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGt                                                                                                 >  2:37245/1‑150 (MQ=255)                                                      ccGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGc                                                                                   <  2:487683/150‑1 (MQ=255)                                                            tCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCaa                                                                             >  1:729841/1‑150 (MQ=255)                                                            tCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAAGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCaa                                                                             >  1:540611/1‑150 (MQ=255)                                                                  gCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTCCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGa                                                                       >  2:430970/1‑150 (MQ=255)                                                                         cAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGNCGt                                                                <  2:698392/150‑1 (MQ=255)                                                                          aaCGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGtt                                                               >  1:991359/1‑150 (MQ=255)                                                                           aCGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGgtt                                                              >  1:955247/1‑150 (MQ=255)                                                                              ccgcTGGCTACTCGCTGGACGGACTGAGACTCGCATCCACGGGCTATGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGcc                                                           <  2:181726/150‑1 (MQ=255)                                                                                      tACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGAt                                                                      <  1:158554/131‑1 (MQ=255)                                                                                      tACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGAt                                                                      >  2:158554/1‑131 (MQ=255)                                                                                       aCTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGc                                                  <  1:712541/150‑1 (MQ=255)                                                                                            ctggcggaatgcggcctcgcccttgaaggcggcacgcaggccgtccagcTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGc                                                  <  1:447176‑M2/96‑1 (MQ=255)                                                                                            ctggcggaatgcggcctcgcccttgaaggcggcacgcaggccgtccagcTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGc                                                  >  2:447176‑M2/50‑145 (MQ=255)                                                                                            CTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATTAAAATCGCCGTTTGCCTGCTGGGGCTGAtc                                             >  1:578355‑M1/1‑150 (MQ=255)                                                                                               gcggaatgcggcctcgcccttgaaggcggcacgcaggccgtccagcTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGAtcgtc                                          >  1:129292‑M2/47‑150 (MQ=255)                                                                                               GACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGAtcgtc                                          <  2:90155‑M1/150‑1 (MQ=255)                                                                                                     cTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCctgct                                                       >  2:73129/1‑131 (MQ=255)                                                                                                     cTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCctgct                                                       <  1:73129/131‑1 (MQ=255)                                                                                                     cTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGCt                                     >  2:946964/1‑149 (MQ=255)                                                                                                     cTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGCt                                     <  1:946964/149‑1 (MQ=255)                                                                                                       gCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGCTGtt                                  >  2:110830/1‑150 (MQ=255)                                                                                                                 ttCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGCTGTTCAACTcggcg                        <  2:100858/150‑1 (MQ=255)                                                                                                                    aaGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGCTGTTCAACTCGGCGGTg                     <  1:421391/150‑1 (MQ=255)                                                                                                                    aaGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGCTGTTCAACTCGGCGGTg                     <  1:303005/150‑1 (MQ=255)                                                                                                                      tggCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGCTGTTCAACTCGGCGGTGGa                   <  1:385186/149‑1 (MQ=255)                                                                                                                      gggCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGCTGTTCAACTCGGCGGTGGa                   <  2:973685/150‑1 (MQ=255)                                                                                                                             gCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGc                                      >  2:686151/1‑124 (MQ=255)                                                                                                                             gCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGc                                      <  1:686151/124‑1 (MQ=255)                                                                                                                              ccGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGTCTGCTGGGGCTGATCGTCGAGCTGTTCAACTCGGCGGTGGAGGCGGCCa           >  2:573726/1‑150 (MQ=255)                                                                                                                                  aTTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCggg                                                                                <  2:1063876/77‑1 (MQ=255)                                                                                                                                  aTTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCggg                                                                                >  1:1063876/1‑77 (MQ=255)                                                                                                                                       gCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGCTGTTCAACTCGGCGGTGGAGGCGGCCATCGATCGCa  >  1:293379/1‑150 (MQ=255)                                                                                                                                             |                                                                                                                                                CTGGCCTTTCTGCTGTGAAGTGACTCACATGACATCGCCATTCAAGGGCCAGACCGGCCTCAAACGCATCTTCAACGCCGCTGGCTACTCGCTGGACGGCCTGCGTGCCGCCTTCAAGGGCGAGGCCGCATTCCGCCAGCTGGTGCTGCTCAACGTGCTGCTGATCCCGATCGCCTTCTGGCTGCCGGTCAGCCGCGCCGAGCGGGCAATCATGATCGCCGTTTGCCTGCTGGGGCTGATCGTCGAGCTGTTCAACTCGGCGGTGGAGGCGGCCATCGATCGCA  >  NC_002947/1832750‑1833033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.