New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2281445 =	45 (1.040)	3 (0.070)	3/240	NT	7.1%	coding (224/894 nt)	PP_2009	1‑aminocyclopropane‑1‑carboxylate deaminase
	?	NC_002947	2281500 =	36 (0.880)					coding (279/894 nt)	PP_2009	1‑aminocyclopropane‑1‑carboxylate deaminase

TCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAA  >  NC_002947/2281352‑2281647                                                                                                                                                      |                                                                                                                                                    tCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATg                                                                                                                                                    <  1:75402/150‑1 (MQ=255)    aaCTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGCTCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGccc                                                                                                                                                 >  2:1002004/1‑150 (MQ=255)    aaCTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGccc                                                                                                                                                 >  2:1002122/1‑150 (MQ=255)      cTACGCCACCACCTGCAACAGGCGGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGTCACCGTCGGCCTGTTACGCG‑GCCATGCCCAg                                                                                                                                               <  2:208878/150‑1 (MQ=255)           ccactaCCTGCAACAGGCCGGCGCAAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAAGCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCCTGCCCACGacac                                                                                                                                          >  2:470524/1‑150 (MQ=255)            tgcacggtagccgccgtagcctagccaatgcagttccatgcccagcgcctgcaggtcacgcacggttggcgtgtcctgggcaTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATg                                                                                                                                                    <  1:532847‑M1/57‑1 (MQ=255)            tgcacggtagccgccgtagcctagccaatgcagttccatgcccagcgcctgcaggtcacgcacggttggcgtgtcctgggcaTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATg                                                                                                                                                    >  2:532847‑M1/83‑139 (MQ=255)                accTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCaa                                                                                                                                     >  1:1109109/1‑150 (MQ=255)                        cAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACCCCTTCGTCACGGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACcgtgcgt                                                                                                                             <  1:411105/150‑1 (MQ=255)                           gCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGAc                                                                                                                          <  2:209506/150‑1 (MQ=255)                                      cAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCt                                                                                                               <  1:780175/150‑1 (MQ=255)                                          gCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGc                                                                                                           >  1:354897/1‑150 (MQ=255)                                            tCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTATAAGCTTCGCCACCTTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCAt                                                                                                         >  1:688950/1‑150 (MQ=255)                                              cAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATgg                                                                                                       >  1:945917/1‑150 (MQ=255)                                                ggCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGaa                                                                                                     <  2:354897/150‑1 (MQ=255)                                                 gCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAAc                                                                                                    >  2:837568/1‑150 (MQ=255)                                                  ccTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCGTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACt                                                                                                   >  2:770389/1‑150 (MQ=255)                                                    tGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGc                                                                                                 <  1:677205/150‑1 (MQ=255)                                                             tCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGGCCTGCAGGCGCTGGGCATGGAACTGCATTggctag                                                                                        <  1:1002004/150‑1 (MQ=255)                                                             tCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTggctag                                                                                        <  1:1002122/150‑1 (MQ=255)                                                                 cggTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTggctaggcta                                                                                    >  2:977296/1‑150 (MQ=255)                                                                   gTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTAcg                                                                                  >  1:589827/1‑150 (MQ=255)                                                                   gTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTAcg                                                                                  >  1:210364/1‑150 (MQ=255)                                                                        cATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACggcggc                                                                             >  1:658978/1‑150 (MQ=255)                                                                        cATTCCAACCATCGGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGG‑CTCCTCCGCGCGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACggcggc                                                                             <  1:619963/150‑1 (MQ=255)                                                                              aaCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGt                                                                       >  1:784726/1‑150 (MQ=255)                                                                              aaCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGt                                                                       >  2:837562/1‑150 (MQ=255)                                                                              aaCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGt                                                                       >  2:425719/1‑150 (MQ=255)                                                                              aaCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGt                                                                       >  2:102189/1‑150 (MQ=255)                                                                                       cACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCa                                                                                                          >  1:1028134/1‑106 (MQ=255)                                                                                       cACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCa                                                                                                          <  2:1028134/106‑1 (MQ=255)                                                                                          gCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACAGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGaa                                                           <  1:1081743/150‑1 (MQ=255)                                                                                             ttGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAAccc                                                        >  1:314497/1‑150 (MQ=255)                                                                                             catggccgcgtaacaggccgacggtggcgaagccgaaacgcttgccggcagcggccaTGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCa                                                                    >  2:532847‑M2/58‑139 (MQ=255)                                                                                             catggccgcgtaacaggccgacggtggcgaagccgaaacgcttgccggcagcggccaTGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCa                                                                    <  1:532847‑M2/82‑1 (MQ=255)                                                                                               tggccgcgtaacaggccgacggtggcgaagccgaaacgcttgccggcagcggccaTGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCg                                                       >  2:419720‑M2/56‑150 (MQ=255)                                                                                                   GCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTc                                                  >  2:658978‑M1/1‑150 (MQ=255)                                                                                                     tGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTg                                                <  1:711584/150‑1 (MQ=255)                                                                                                        cGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGa                                             >  1:825238/1‑150 (MQ=255)                                                                                                                gTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGc                                     >  1:568484/1‑150 (MQ=255)                                                                                                                      gCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAgcgc                               <  1:102189/150‑1 (MQ=255)                                                                                                                            ccACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACCGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATc                         >  1:852725/1‑150 (MQ=255)                                                                                                                             cACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATcc                        >  1:1056733/1‑150 (MQ=255)                                                                                                                               ccGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAg                      <  2:784726/150‑1 (MQ=255)                                                                                                                                 gTCGGCCTGTTACGCG‑GCCATCCCTAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCTTGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGc                    <  2:563040/150‑1 (MQ=255)                                                                                                                                          ttACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGc           <  2:825238/150‑1 (MQ=255)                                                                                                                                            aCGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCAt         >  1:941693/1‑150 (MQ=255)                                                                                                                                               gcggccaTGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCCCTGCATcc       >  1:511328‑M2/8‑150 (MQ=255)                                                                                                                                                   ccaTGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGa   >  1:1111339‑M2/4‑150 (MQ=255)                                                                                                                                                    caTGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGATACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCGCCGaa  >  1:325047‑M2/3‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                    TCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAA  >  NC_002947/2281352‑2281647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.