New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2310823 =	34 (0.780)	4 (0.100)	4/230	NT	10.8%	coding (531/1311 nt)	PP_2033	hypothetical protein
	?	NC_002947	2310888 =	35 (0.890)					coding (596/1311 nt)	PP_2033	hypothetical protein

CAACCTGCTGCACGATGGCGCGGGCGGGCTGTTGTCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGTGCACTCGAATATTGGGGGTGGTTACCCGG  >  NC_002947/2310745‑2311037                                                                                                                                                |                                                                                                                                                      cAACCTGCTGCACGATGGCGCGGGCGGGCTGTTGTCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTgcg                                                                                                                                                 >  2:992202/1‑150 (MQ=255)     ctgctgCACGATGGCGCGGGCGGGCTGTTGTCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCgcctg                                                                                                                                             >  2:769789/1‑150 (MQ=255)       gctgcACGATGGCGCGGGCGGGCTGTTGTCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGAGCGTTTGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCgcctggg                                                                                                                                           >  1:912006/1‑150 (MQ=255)        gggcACGAGGGCGCGGGCGGGCTGTTGTCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCgcctgggc                                                                                                                                          <  2:114327/148‑1 (MQ=255)                 ggCGCGGGCGGGCTGTTGTCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCg                                                                                                                                 <  2:1060870/150‑1 (MQ=255)                      gggcgggcTGTTGTCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGatat                                                                                                                            >  1:968142/1‑150 (MQ=255)                         cgggcTGTTGTCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGc                                                                                                                         <  1:8467/150‑1 (MQ=255)                             cTGTTGTCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGccc                                                                                                                       <  2:788875/148‑1 (MQ=255)                             cTGTTGTCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGccc                                                                                                                       >  1:788875/1‑148 (MQ=255)                              tgttgtCGGTGGCGTGCGAACCATCAATCAACTTTATCGGCCTGTTCGACACTGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATCTTGCGCGGc                                                                                                                    >  2:494727/1‑150 (MQ=255)                              tgttgtCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGc                                                                                                                    >  2:855272/1‑150 (MQ=255)                              tgttgtCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGc                                                                                                                    >  2:855258/1‑150 (MQ=255)                                   tCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACgtg                                                                                                               >  1:447560/1‑150 (MQ=255)                                   tCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACgtg                                                                                                               >  2:719247/1‑150 (MQ=255)                                   tCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACgtg                                                                                                               >  2:650858/1‑150 (MQ=255)                                                    cTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGa                                                                                              >  2:947942/1‑150 (MQ=255)                                                     tcaatcaaCTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAg                                                                                             >  1:621338/1‑150 (MQ=255)                                                       aatcaaCTTTATCGGCCTGGTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACGTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGa                                                                                           <  2:250015/150‑1 (MQ=255)                                                         tcaaCTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACg                                                                                         >  1:263178/1‑150 (MQ=255)                                                               ttATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAgcggc                                                                                   <  2:968142/150‑1 (MQ=255)                                                                         gTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACtt                                                                         >  2:465224/1‑150 (MQ=255)                                                                             gACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCACCCGCTGGGAATGGTGGTGGGTTAGGGGCTGCACGGGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCGTAACTTCCCg                                                                     >  1:78662/1‑150 (MQ=255)                                                                               caccgtggcggccgtctgcagggtcgaagtcaccctgtaagggcgcaatgatcgccgccacggtgGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATaa                                                                            <  1:1109912‑M2/76‑1 (MQ=255)                                                                               caccgtggcggccgtctgcagggtcgaagtcaccctgtaagggcgcaatgatcgccgccacggtgGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATaa                                                                            >  2:1109912‑M2/66‑141 (MQ=255)                                                                               CACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCt                                                                   >  1:738063‑M1/1‑150 (MQ=255)                                                                                ACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTg                                                                  >  1:769789‑M1/1‑150 (MQ=255)                                                                                    TGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTgc                                                              >  1:650858‑M1/1‑150 (MQ=255)                                                                                         GCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGNAGt                                                         >  2:703306‑M1/1‑150 (MQ=255)                                                                                           cgtctgcagggtcgaagtcaccctgtaagggcgcaatgatcgccgccacggtgGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGa                                                                                        <  2:351713‑M2/64‑1 (MQ=255)                                                                                           cgtctgcagggtcgaagtcaccctgtaagggcgcaatgatcgccgccacggtgGCCTGCGCCTGGGCCTGGGTGCGGAGATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGa                                                                                        >  1:351713‑M2/54‑117 (MQ=255)                                                                                                ttGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACg                                                  <  2:263178/150‑1 (MQ=255)                                                                                                            aGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGtgctgc                                      >  2:1084853/1‑150 (MQ=255)                                                                                                              ggTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCg                                    >  2:436132/1‑150 (MQ=255)                                                                                                               gTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCga                                   <  1:436132/150‑2 (MQ=255)                                                                                                                   cTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGt                               <  1:855258/150‑1 (MQ=255)                                                                                                                   cTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGt                               <  1:855272/150‑1 (MQ=255)                                                                                                                    ttCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGTg                              >  1:447827/1‑150 (MQ=255)                                                                                                                    ttCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGTg                              >  2:84286/1‑150 (MQ=255)                                                                                                                    ttCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGTg                              >  2:895312/1‑150 (MQ=255)                                                                                                                       gACCCTGCAGACGGTCGCGACGGTGGCCTGCGCCTGGGCATGGGTGCGGATATTGCCCGGCACGTGTTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGTGCAc                           >  2:496792/1‑150 (MQ=255)                                                                                                                         cccTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGTGCACTc                         >  1:452858/1‑150 (MQ=255)                                                                                                                          ccTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTg                                                                                                                          >  1:762395/1‑52 (MQ=255)                                                                                                                          ccTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTg                                                                                                                          <  2:762395/52‑1 (MQ=255)                                                                                                                               aGACGGCCGCCACGGTGGCCTACGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGt                               <  2:1115944/138‑1 (MQ=255)                                                                                                                               aGACGGCCGCCACGGTGGCCTACGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGt                               >  1:1115944/1‑138 (MQ=255)                                                                                                                                  cGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGTGCACTCGAATATTgg                <  1:465224/150‑1 (MQ=255)                                                                                                                                   ggCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGTGCACTCGAATATTggg               <  1:1084853/150‑1 (MQ=255)                                                                                                                                   ggCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGTGCACTCGAATATTggg               <  1:878041/150‑1 (MQ=255)                                                                                                                                         cacggtgGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGTGCACTCGAATATTGGGggtggt         >  1:1116936‑M2/8‑150 (MQ=255)                                                                                                                                                gCCTACGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGGCGAGGACGAGCGGCGGCATAACTTCCCGCTGGAGCGCAGTGGTCACGACATCGTGCTGCCGGGCGTGCACTCGAATATTGGGGTTGGTTACCCgg  >  1:359393/1‑150 (MQ=255)                                                                                                                                                |                                                                                                                                                      CAACCTGCTGCACGATGGCGCGGGCGGGCTGTTGTCGGTGGCGTGCGAAACCTCAATCAACTTTATCGGCCTGTTCGACACCGTGGCGGCGATCATTGCGCCCTTACAGGGTGACTTCGACCCTGCAGACGGCCGCCACGGTGGCCTGCGCCTGGGCCTGGGTGCGGATATTGCCCGGCACGTGGTGCAGCTGGTGGCCGAGGACGAGCGGCGGCATAACTTCCCGCTGGTGCGCAGTGGCCACGACATCGTGCTGCCGGGCGTGCACTCGAATATTGGGGGTGGTTACCCGG  >  NC_002947/2310745‑2311037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.