New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3121091	39 (0.900)	3 (0.070)	3/246	NT	7.2%	coding (396/753 nt)	PP_2737	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	= 3121106	39 (0.930)					coding (381/753 nt)	PP_2737	short‑chain dehydrogenase/reductase family oxidoreductase

GCTCACCAGGGTGACCGCGATGCCTTCGCGGGCCAGGTCGATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGCCCAGGCTCCAGGTATTCGCAGGTGCCGGCATTGAGAATGGC  >  NC_002947/3120959‑3121252                                                                                                                                                    |                                                                                                                                                   gCTCACCAGGGTGACCGCGATGCCTTCGCGGGCCAGGTCGATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGgg                                                                                                                                                  >  1:92276‑M2/1‑148 (MQ=255)   tCACCAGGGTGACCGCGATGCCTTCGCGGGCCAGGTCGATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGgggc                                                                                                                                                <  2:1046867‑M2/150‑5 (MQ=255)           gTGACCGCGATGCCTTCGCGGGCCAGGTCGATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCt                                                                                                                                        <  1:904209/150‑1 (MQ=255)                       ccTTCGCGGGCCAGGTCGATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAg                                                                                                                            <  2:716183/150‑1 (MQ=255)                             cgGGCCAGGTCGATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGt                                                                                                                      <  1:1128081/150‑1 (MQ=255)                                     gTCGATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTgccgccgc                                                                                                              >  1:697342/1‑150 (MQ=255)                                        gATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAg                                                                                                           <  1:1046867/150‑1 (MQ=255)                                           tCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGACCTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCa                                                                                                        <  2:997408/150‑1 (MQ=255)                                             gCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTGCCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGt                                                                                                      >  1:907916/1‑150 (MQ=255)                                                   aCTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGNTGa                                                                                                <  2:697342/150‑1 (MQ=255)                                                     tCCACCAGATAGCGCACTGCGGCCTTGGAGGCCGCGGAAGCGCCGTCGCTGGGCAAGGCCAGCCAGGGGACGGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGAAGCTGACg                                                                                              >  1:922152/1‑150 (MQ=255)                                                     tCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACg                                                                                              >  1:220647/1‑150 (MQ=255)                                                     tCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACg                                                                                              >  2:490557/1‑150 (MQ=255)                                                       caccaGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGc                                                                                                                                          <  1:1502/104‑1 (MQ=255)                                                       caccaGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGc                                                                                                                                          >  2:1502/1‑104 (MQ=255)                                                       caccaGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGcc                                                                                            >  1:1052408/1‑150 (MQ=255)                                                         ccaGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCca                                                                                          <  2:922152/150‑1 (MQ=255)                                                                 cgcACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGttt                                                                                                                                            >  1:868016/1‑92 (MQ=255)                                                                 cgcACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGttt                                                                                                                                            <  2:868016/92‑1 (MQ=255)                                                                 cgcACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCATACGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTg                                                                                  <  1:79367/150‑1 (MQ=255)                                                                           ccTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGa                                                                        >  1:1126534/1‑150 (MQ=255)                                                                            cTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGAc                                                                       >  2:582864/1‑150 (MQ=255)                                                                            cTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCGGACGCCCAGCAGGTTGGTGCGCATGAc                                                                       >  1:551203/1‑150 (MQ=255)                                                                                    ccccATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGa                                                               <  1:582864/150‑1 (MQ=255)                                                                                      ccATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGAcc                                                             >  2:1009931/1‑150 (MQ=255)                                                                                         tAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCGGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAAc                                                          <  2:820553/150‑1 (MQ=255)                                                                                                        ggCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGc                                           <  2:1126534/150‑1 (MQ=255)                                                                                                         gCAAGGCCAGCCAGGTTGCCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGcc                                          <  2:907916/150‑1 (MQ=255)                                                                                                          cAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGccc                                         <  2:220647/150‑1 (MQ=255)                                                                                                           aaGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGgggcagttcggtaacctggctggcctatccccgcgctggcgcctatggggcgtccaaggccgcagtgggcgtgggtgttgagtcacagcgaatcgacctggcccgcga                                        <  2:640926‑M2/150‑109 (MQ=255)                                                                                                           aaGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGCCCa                                        <  2:474465/150‑1 (MQ=255)                                                                                                             ggCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGCCCAgg                                      <  2:756846/150‑1 (MQ=255)                                                                                                                   ccagGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGCCCAGGCTCCAg                                <  2:1052408/150‑1 (MQ=255)                                                                                                                          aCCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGCCCAGGCTCCAGGTATTCg                         >  1:348020/1‑150 (MQ=255)                                                                                                                             gAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGCCCAGGCTCCAGGTATTCGCAg                      <  2:348020/150‑1 (MQ=255)                                                                                                                                  gCCCATCACCACCAGGTGGgggcagttcggtaacctggctggccttgccccgcgctggcgcctatggggcgtccaaggcc                                                                                       >  1:303486‑M2/1‑19 (MQ=255)                                                                                                                                  gCCCATCACCACCAGGTGGgggcagttcggtaacctggctggccttgccccgcgctggcgcctatggggcgtccaaggcc                                                                                       <  2:303486‑M2/80‑62 (MQ=255)                                                                                                                                   cccATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGCCCAGGCTCCAGGTATTCGCAGGTGCCg                >  1:124286/1‑150 (MQ=255)                                                                                                                                   cccATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGCCCAGGCTCCAGGTATTCGCAGGTGCCg                >  1:124002/1‑150 (MQ=255)                                                                                                                                      aTCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGCCCAGGCTCCAGGTATTCGCAGGTGCCGGCa             >  1:936217/1‑150 (MQ=255)                                                                                                                                         accaccAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGa                                                    >  2:634820/1‑108 (MQ=255)                                                                                                                                         accaccAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGa                                                    <  1:634820/108‑1 (MQ=255)                                                                                                                                           caccaGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAg                                                                                                           >  1:542066/1‑51 (MQ=255)                                                                                                                                           caccaGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAg                                                                                                           <  2:542066/51‑1 (MQ=255)                                                                                                                                               aGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGAcgcg                                                                    >  2:436779/1‑86 (MQ=255)                                                                                                                                               aGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGAcgcg                                                                    <  1:436779/86‑1 (MQ=255)                                                                                                                                                 gTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGCCCAGGCTCCAGGTATTCGCAGGTGCCGGCATTGAGAATGGc  <  1:746899/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GCTCACCAGGGTGACCGCGATGCCTTCGCGGGCCAGGTCGATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCATCACCACCAGGTGGGGGCGTTTGCCTGCGCGAAGCAAGGGCAGTGCCGCCGCCAGGCAGTAGCTGACGCCCAGCAGGTTGGTGCGCATGACGCGCTCGACCAACGCCGGATCGAAATGCCCAGGCTCCAGGTATTCGCAGGTGCCGGCATTGAGAATGGC  >  NC_002947/3120959‑3121252

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.