New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3150122	36 (0.830)	4 (0.100)	4/234	NT	9.9%	coding (183/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein
	?	NC_002947	= 3150141	40 (1.000)					coding (202/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein

ATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTCGTCTTTGCCGAAGGTCAG  >  NC_002947/3149992‑3150290                                                                                                                                                      |                                                                                                                                                      aTCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCa                                                                                                                                                       >  1:1069594/1‑150 (MQ=255)    aaCGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAgcc                                                                                                                                                    <  1:172038‑M2/150‑4 (MQ=255)                 cgttgcgtggCGCCACAAGCTTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGcccgca                                                                                                                                       <  1:38465/150‑4 (MQ=255)                            gcCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTgg                                                                                                                            <  2:635973/150‑1 (MQ=255)                             ccACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGc                                                                                                                           >  2:862142/1‑150 (MQ=255)                              cacaAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGCCAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCa                                                                                                                          >  1:965906/1‑150 (MQ=255)                                      tCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTggc                                                                                                                  >  2:873774/1‑150 (MQ=255)                                      tCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTggc                                                                                                                  >  1:725592/1‑150 (MQ=255)                                      tCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTggc                                                                                                                  <  2:713367/150‑1 (MQ=255)                                        tAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTggcgg                                                                                                                >  2:776707/1‑150 (MQ=255)                                            ccTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCa                                                                                                            <  1:943056/150‑1 (MQ=255)                                            ccTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCa                                                                                                            >  2:604453/1‑150 (MQ=255)                                              tgtgGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTCTGTAGCAGGCTGCGCGTGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGt                                                                                                          <  1:806680/150‑1 (MQ=255)                                               gtgGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTg                                                                                                         <  2:725592/150‑1 (MQ=255)                                                         cgcAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGggcggc                                                                                               <  1:95522/150‑1 (MQ=255)                                                             gcagggCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTcg                                                                                           >  1:770874/4‑150 (MQ=255)                                                                    gcAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACt                                                                                    >  1:152165/1‑150 (MQ=255)                                                                      aaCTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGc                                                                                  >  2:662597/1‑150 (MQ=255)                                                                         tgctgGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCg                                                                               >  1:415303/1‑150 (MQ=255)                                                                           ctgGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGAt                                                                             >  2:1100827/1‑150 (MQ=255)                                                                              gCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGGCGCGGCACTGCTCGATCCg                                                                          >  1:649910/1‑150 (MQ=255)                                                                              agcccggTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGAGAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGCCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCg                                                                          >  2:585883/6‑150 (MQ=255)                                                                               ccGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGc                                                                         <  1:1057770/150‑1 (MQ=255)                                                                               ccGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGc                                                                         <  1:1100827/150‑1 (MQ=255)                                                                                cGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGgcggcg                                                                                                              <  2:1063427/112‑1 (MQ=255)                                                                                cGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGgcggcg                                                                                                              >  1:1063427/1‑112 (MQ=255)                                                                                             cTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGAcgcg                                                           <  1:873774/150‑1 (MQ=255)                                                                                               ggCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGa                                                         <  1:604453/150‑1 (MQ=255)                                                                                                        gCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGAc                                                >  2:139877/1‑150 (MQ=255)                                                                                                                  gCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGt                                      >  1:643381/1‑150 (MQ=255)                                                                                                                   ccGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAgccggccgcgaagccggcctcgcgcagcccggtggccaggctctgcacctcggccagca                                                                                            >  2:652773‑M2/1‑36 (MQ=255)                                                                                                                   ccGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAgccggccgcgaagccggcctcgcgcagcccggtggccaggctctgcacctcggccagca                                                                                            <  1:652773‑M2/95‑60 (MQ=255)                                                                                                                   ccGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTg                                     <  2:319680/150‑1 (MQ=255)                                                                                                                    cGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGa                                    >  2:1078056/1‑150 (MQ=255)                                                                                                                     ggCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGaa                                   <  2:415303/150‑1 (MQ=255)                                                                                                                              gccggcGACAGCCTGCTGATCGTCAgccggccgcgaagccggcctcgcgcagcccggtggccaggctctgcacctcggccagcagttgcgc                                                                                     <  1:994228‑M2/91‑67 (MQ=255)                                                                                                                              gccggcGACAGCCTGCTGATCGTCAgccggccgcgaagccggcctcgcgcagcccggtggccaggctctgcacctcggccagcagttgcgc                                                                                     >  2:994228‑M2/1‑25 (MQ=255)                                                                                                                                cggcGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCgg                        <  2:111153/150‑1 (MQ=255)                                                                                                                                    gACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTc                    <  1:776707/150‑1 (MQ=255)                                                                                                                                    gACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTc                    >  2:379893/1‑150 (MQ=255)                                                                                                                                         ccTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTCGTCtt               >  2:766490/1‑150 (MQ=255)                                                                                                                                          ctgctgATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTCGTCttt              <  2:1069594/150‑1 (MQ=255)                                                                                                                                           tgctgATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTCGTCTTTg             >  1:100552/1‑150 (MQ=255)                                                                                                                                             ctgATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTCGTCTTTGcc           >  2:748158/1‑150 (MQ=255)                                                                                                                                              tgATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTCGTCTTTGCCg          >  1:554282/1‑150 (MQ=255)                                                                                                                                                 tCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTCGTCTTTGCCGAAg       >  2:572337/1‑150 (MQ=255)                                                                                                                                                 tCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTCGTCTTTGCCGAAg       <  1:1078056/150‑1 (MQ=255)                                                                                                                                                   gTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTCGTCTTTGCCGAAGGt     <  1:766490/150‑1 (MQ=255)                                                                                                                                                      aGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTCGTCTTTGCCGAAGGTCag  <  1:662597/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      ATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGTTTCGTCTTTGCCGAAGGTCAG  >  NC_002947/3149992‑3150290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.