New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3665255 | 53 (1.220) | 3 (0.070) | 3/250 | NT | 5.5% | coding (120/957 nt) | PP_3229 | aliphatic sulfonate‑binding protein |
? | NC_002947 | = 3665275 | 50 (1.170) | coding (140/957 nt) | PP_3229 | aliphatic sulfonate‑binding protein |
AGACGTATTCATGACCTTTAAACCCCTGCGCCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTGGCAATGTCGACCTCTCGGCGGACGTTGCCGACACCGTGCCGGTGTTCA > NC_002947/3665126‑3665415 | agaCGTATTCATGACCTTTAAACCCCTGCGCCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAgggg < 2:116590/150‑1 (MQ=255) aCGTATTCATGACCTTTAAACCCCTGCGCCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGca < 2:134708‑M2/150‑3 (MQ=255) aTGACCTTTAAACCCCTGCGCCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGaa > 2:31098/1‑150 (MQ=255) gcccgttAAACCCCTGCGCCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATAGACTAC‑CAGAAAT‑CCTCGACCCTCCTGACCGTG‑‑CTGGAGGTTAGAGGCGCTCGCGAACa > 1:588102/6‑150 (MQ=255) tttAAACCCCTGCGCCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAgcgc > 1:1080401/1‑150 (MQ=255) ttAAACCCCTGCGCCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGcc < 2:733407/150‑1 (MQ=255) aaaCCCCTGCGCCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGTCTTGCCAGCGCCGTGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGCCCCTGGCCTTCAG‑‑CAGGGTcagcagggtcgaggatttc > 2:603686‑M2/1‑131 (MQ=255) ccccTGCGCCAGCTGGGCTTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAg < 2:68767/150‑1 (MQ=255) cccTGCGCCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCATGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAgg > 1:353273/1‑150 (MQ=255) cgcCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAg < 2:1080401/150‑1 (MQ=255) cgcCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAg > 1:642759/1‑150 (MQ=255) cgcCAGCTGGGCCTGCCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAg < 1:953819/150‑1 (MQ=255) gCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTTTCGAACAGCGCCTGCAGGCCGAGGGCAt > 1:550404/1‑150 (MQ=255) tGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTc < 1:31098/150‑1 (MQ=255) tGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTc > 1:821617/1‑150 (MQ=255) ggCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTcgc < 2:163333/150‑1 (MQ=255) ggCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTcgc < 1:543190/150‑1 (MQ=255) gctgctCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTg > 1:584051/1‑150 (MQ=255) gctgctCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTg < 2:1101367/150‑1 (MQ=255) tgctCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGc < 2:627917/150‑1 (MQ=255) gctCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCa < 2:526280/150‑1 (MQ=255) tCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCAAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACg > 1:1025388/1‑150 (MQ=255) cGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTTCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGa < 2:821617/150‑1 (MQ=255) cAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGtt > 2:292393/1‑150 (MQ=255) cAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGtt > 2:917272/1‑150 (MQ=255) aggcCTTGCTGCAAAGCCTTGCCAGCACCGAGCAGACCCTGCGCATCGGCTACATAGAGCG‑CCACCTGGC‑ACTCGTTCGG‑‑CTGAAGTCTATGGCCACTCTCGACCAGCCACTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTcc < 1:810372/148‑1 (MQ=255) ccTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCa < 2:723008/150‑1 (MQ=255) ttGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGc > 2:623657/1‑150 (MQ=255) ttGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGc > 2:804096/1‑150 (MQ=255) tgctgcCAAGCCTTGCCAGCGCCGAGCAGACGCTCCGCATCGGCTA‑‑GACAATTCCCTCTACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCg < 2:579038/150‑1 (MQ=255) ctgcCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGcc < 1:445099/103‑1 (MQ=255) ctgcCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGcc > 2:445099/1‑103 (MQ=255) ttGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CATAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCAGGCCgctgg < 1:804096/150‑2 (MQ=255) ccAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTAGCACGAGTTCCCCAGCGGCCTGCCGCTGCTgg < 2:1059474/150‑1 (MQ=255) cAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGa < 1:665909/150‑1 (MQ=255) cGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCt < 1:370390/150‑1 (MQ=255) cAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAAc > 1:75399/1‑150 (MQ=255) aGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAAcc < 2:457553/150‑1 (MQ=255) gACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCACCCGCGGCCTGCCGCTGCTGGAGGCCCTGGACCt > 2:140538/1‑150 (MQ=255) cccTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAGCAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTg < 1:793655/150‑1 (MQ=255) cccTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGTGGCCTGCCGCTGCTGGAGGCCCTGAACCTTg < 1:67601/150‑1 (MQ=255) tCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTGGCAATGTCg > 2:921226/1‑150 (MQ=255) gCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCGCTGAGCCTCGGCGAtcgccacc > 2:905355/1‑143 (MQ=255) tAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGACCAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTGGCAATGTCGACctc > 1:263641/1‑150 (MQ=255) c‑cAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTGGCAATGTCGACCtctc < 2:642759/150‑1 (MQ=255) gAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTGGCAATGTCGACCTCTcggc < 1:6617/150‑1 (MQ=255) gAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGAACACTCTCGAACAGCGCCTGCAGGCCGAGGGCAATCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGGCCTGAACCTTGGCAATGTCGACCTCTcggc > 1:303889/1‑150 (MQ=255) tCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTGGCAATGTCGACCTCTCGGCGGACGtt > 1:177162/1‑150 (MQ=255) gaccctgctgaccctg‑‑ctGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCATGAACCTTGGCAATGTCGACCTCTCGGCGGACGTTGc < 2:584051/150‑1 (MQ=255) tgaccctg‑‑ctgaAGGCCAGGGGcagcagggtcgaggatttctggtagccgatgcgcagg > 2:956833‑M2/1‑22 (MQ=255) tgaccctg‑‑ctgaAGGCCAGGGGcagcagggtcgaggatttctggtagccgatgcgcagg < 1:956833‑M2/59‑38 (MQ=255) cctg‑‑ctgaAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTGGCAATGTCGACCTCTCGGCGGACGTTGCCGACACCGTGcc < 1:292393/150‑1 (MQ=255) cctg‑‑ctgaAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTGGCAATGTCGACCTCTCGGCGGACGTTGCCGACACCGTGcc > 1:763497/1‑150 (MQ=255) g‑‑ctgaAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTGGCAATGTCGACCTCTCGGCGGACGTTGCCGACACCGTGCCGgt < 1:623657/150‑1 (MQ=255) aGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTGGCAATGTCGACCTCTCGGCGGACGTTGCCGACACCGTGCCGGTGTTCa < 2:550404/150‑1 (MQ=255) | AGACGTATTCATGACCTTTAAACCCCTGCGCCAGCTGGGCCTGGCGCTGCTCGCCAGCGCCTTGCTGCCAAGCCTTGCCAGCGCCGAGCAGACCCTGCGCATCGGCTAC‑CAGAAAT‑CCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCACTCTCGAACAGCGCCTGCAGGCCGAGGGCATTCGCGTGACCTGGCACGAGTTCCCCAGCGGCCTGCCGCTGCTGGAGGCCCTGAACCTTGGCAATGTCGACCTCTCGGCGGACGTTGCCGACACCGTGCCGGTGTTCA > NC_002947/3665126‑3665415 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |