New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4830927 = | 35 (0.810) | 4 (0.090) | 4/248 | NT | 9.5% | coding (308/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | 4830978 = | 42 (0.990) | coding (257/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
TCCAGGCCCTGCAGGCTGTCGCGCAGCGCCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTCCCGGTAGCTGAGCACGGCCTGCTC > NC_002947/4830834‑4831126 | cgccttgcaggggcgcgccagcttcggtgaccgtgccgtgctgttgttccccagcgggccagattacgtggcggcgttcttcggctgcctgtaTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAgg > 1:234399‑M1/94‑150 (MQ=255) gCCCTGCAGGCTGTCGCGCAGCGCCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGcc > 2:506321/1‑150 (MQ=255) cTGCAGGCTGTCGCGCAGCGCCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCGTACAGGCAGCCgaa > 1:132096/1‑150 (MQ=255) tGCAGGCTGTCGCGCAGCGCCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCgaag < 2:371072/150‑1 (MQ=255) aGGCTGTCGCGCAGCGCCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAAc < 1:485689/150‑1 (MQ=255) gTCGCGCAGCGCCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAAcgccgc < 2:35612/150‑1 (MQ=255) gTCGCGCAGCGCCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAAcgccgc > 1:659981/1‑150 (MQ=255) tCGCGCAGCGCCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACgccgcc > 2:384005/1‑150 (MQ=255) cgcAGCGCCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACg > 2:279746/1‑150 (MQ=255) gcAGCGCCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGt > 2:53866/1‑150 (MQ=255) gcgcCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAAt > 1:646659/1‑150 (MQ=255) tCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGcc < 2:584279/144‑1 (MQ=255) tCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGcc > 1:584279/1‑144 (MQ=255) gtgctgttgttccccagcgggccagattacgtggcggcgttcttcggctgcctgtaTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATa < 1:1037139‑M1/53‑1 (MQ=255) gtgctgttgttccccagcgggccagattacgtggcggcgttcttcggctgcctgtaTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATa > 2:1037139‑M1/57‑109 (MQ=255) agcagcagTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTgggg < 2:659981/150‑1 (MQ=255) cagcagTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGaa > 2:532392/1‑150 (MQ=255) cagcagTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGaa < 1:384005/150‑1 (MQ=255) gTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCCGGCCCGCTGGGGAacaaca > 2:172228/1‑150 (MQ=255) gcgGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAgca < 1:53866/150‑1 (MQ=255) cgGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAgcac < 1:296922/150‑1 (MQ=255) ggCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAGCAgcacg < 2:646659/150‑1 (MQ=255) ggCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAgcacg < 2:223577/150‑1 (MQ=255) tCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCa > 1:822376/1‑150 (MQ=255) gatgatCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCAGAAGAACGCCGCCACGTAATCTAGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGaa > 1:180453/1‑150 (MQ=255) gACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGgcg > 1:554879/1‑150 (MQ=255) aCAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGgcgc > 1:999661/1‑150 (MQ=255) aGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGGACCGCGATCACGGCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGGCACCTAAGCTGgcgcgc > 2:615588/1‑150 (MQ=255) tCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATGACGCCCGCATACAGGCATCCGAAGACCGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAg < 2:584058/150‑1 (MQ=255) cTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAggc > 1:786917/1‑150 (MQ=255) cctgtatgcgggcgtgatcgcggtgccggcctacccgccggagtccgcgcgccagcaTACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAggcg > 1:234399‑M2/58‑150 (MQ=255) gTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAggcggc > 2:1109968/1‑150 (MQ=255) tatgcgggcgtgatcgcggtgccggcctacccgccggagtccgcgcgccagcaTACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAgcac < 1:1037139‑M2/56‑1 (MQ=255) tatgcgggcgtgatcgcggtgccggcctacccgccggagtccgcgcgccagcaTACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAgcac > 2:1037139‑M2/54‑109 (MQ=255) gcgtgatcgaggtgctggcctacccgccggagtccgcgatcacgcccgcaTACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGa > 2:596195‑M2/51‑150 (MQ=255) tgGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCt < 2:17460/89‑1 (MQ=255) tgGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCt > 1:17460/1‑89 (MQ=255) ggACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGgtgcgtgc < 2:786917/150‑1 (MQ=255) aCTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCAc > 2:391945/1‑150 (MQ=255) tCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGc < 1:591263/150‑1 (MQ=255) cggcggGTATGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTg > 2:322534/1‑150 (MQ=255) cggcggGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTg < 2:693092/150‑1 (MQ=255) gCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTcc < 1:532392/150‑1 (MQ=255) aCCGCGATCCCGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTCCCGGTAg < 1:415217/150‑1 (MQ=255) aCCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAg > 1:663090/1‑140 (MQ=255) aCCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAg < 2:663090/140‑1 (MQ=255) ccGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTCCCGGTAGc > 1:600191/1‑150 (MQ=255) aCGCGCGCATACCGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTCCCGGTAGCTGAGCACg < 1:1077130/150‑1 (MQ=255) aCGCCCGAATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTCCCGGTAGCTGAGCACg > 1:375580/1‑150 (MQ=255) ccGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTCCCGGTAGCTGAGCACGGCCt > 2:433994/1‑150 (MQ=255) aTACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTCCCGGTAGCTGAGCACGGCCTGCTc < 1:322534‑M2/149‑1 (MQ=255) | TCCAGGCCCTGCAGGCTGTCGCGCAGCGCCGCCACGGTCAGCAGCAGTCGCGGCTCGGCGTCATCGATGATCGACAGCAAACGCTCCTGGTGCTGCTGGCGCGCGGACTCCGGCGGGTAGGCCGGCACCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTCCCGGTAGCTGAGCACGGCCTGCTC > NC_002947/4830834‑4831126 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |