| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5205221 | 46 (1.060) | 5 (0.120) | 5/246 | NT | 10.8% | intergenic (+64/+51) | PP_4585/PP_4586 | TrmH family RNA methyltransferase/hypothetical protein |
| ? | NC_002947 | = 5205267 | 38 (0.910) | intergenic (+110/+5) | PP_4585/PP_4586 | TrmH family RNA methyltransferase/hypothetical protein | |||||
ATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGAACGTTTGGCCTGGGT > NC_002947/5205129‑5205412 | aTACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGc > 1:811773/1‑150 (MQ=255) ccGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAaca > 2:154346/1‑150 (MQ=255) cGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAacac < 1:154346/150‑1 (MQ=255) cGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAacac > 1:882997/1‑150 (MQ=255) ttCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGcac > 2:1070972/1‑150 (MQ=255) aaaTAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATc > 2:667594/1‑150 (MQ=255) aaCAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGaa < 2:410281/150‑1 (MQ=255) aaCAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGaa > 1:526144/1‑150 (MQ=255) cAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCaa < 1:388125/123‑1 (MQ=255) cAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCaa > 2:388125/1‑123 (MQ=255) aGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGaa > 2:1046923/1‑146 (MQ=255) aGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGaa < 1:1046923/146‑1 (MQ=255) gcgAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCAc > 1:816599/1‑150 (MQ=255) aaGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCAc > 2:713742/1‑150 (MQ=255) gCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGaa > 2:983679/1‑150 (MQ=255) ccGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAg < 1:942441/150‑1 (MQ=255) gACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTtc < 1:676389/128‑1 (MQ=255) gACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTtc > 2:676389/1‑128 (MQ=255) gACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCt < 1:667594/150‑1 (MQ=255) aCAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTc < 2:665686/150‑1 (MQ=255) cAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCg < 1:713742/150‑1 (MQ=255) cAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCg < 1:641045/150‑1 (MQ=255) gcgcCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGccc > 2:278866/1‑113 (MQ=255) gcgcCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGccc < 1:278866/113‑1 (MQ=255) ccAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGGCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTg > 1:985676/1‑150 (MQ=255) aTGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTg > 1:788295/1‑150 (MQ=255) cTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCAc > 2:23032/1‑106 (MQ=255) cTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCAc < 1:23032/106‑1 (MQ=255) cTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTgg > 1:589537/1‑147 (MQ=255) cTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTgg < 2:589537/147‑1 (MQ=255) cTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCa > 2:132953/1‑150 (MQ=255) ttGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGggcccaaggcatccctggcgcctgtcccggcctttgacagcccaagcttcgccgcacggccttgttattt < 2:434036‑M2/123‑71 (MQ=255) ttGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGggcccaaggcatccctggcgcctgtcccggcctttgacagcccaagcttcgccgcacggccttgttattt > 1:434036‑M2/1‑53 (MQ=255) ttGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAg > 2:748215/1‑150 (MQ=255) ccTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGggcccaaggcatccctggcgcctgtcccggcctttgacagcccaagcttcgccgcacggccttgttatttgaacttgggccctgagcgggtattcagccctt < 1:489955‑M2/150‑103 (MQ=255) aaaaGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCgg > 1:305558/1‑121 (MQ=255) aaaaGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCgg < 2:305558/121‑1 (MQ=255) aaGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACg > 2:536878/1‑150 (MQ=255) aaGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACAggcccaaggcatccctggcgcctgtcccggcctttgacagcccaagcttcgccgcacggccttgttatttgaacttggtccctgagcgg < 2:389434‑M2/127‑90 (MQ=255) aaGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACAggcccaaggcatccctggcgcctgtcccggcctttgacagcccaagcttcgccgcacggccttgttatttgaacttggtccctgagcgg > 1:389434‑M2/1‑38 (MQ=255) aCGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCg > 1:511601/1‑150 (MQ=255) aaGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCg > 2:1128248/1‑95 (MQ=255) aaGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCg < 1:1128248/95‑1 (MQ=255) aTACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGAACGTTTGGCCTGGgt < 2:816599/150‑1 (MQ=255) | ATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGAACGTTTGGCCTGGGT > NC_002947/5205129‑5205412 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |