New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5422838	46 (1.060)	4 (0.100)	4/240	NT	8.6%	intergenic (‑71/+79)	tesB/PP_4763	acyl‑CoA thioesterase II/acetyltransferase
	?	NC_002947	= 5422854	42 (1.030)					intergenic (‑87/+63)	tesB/PP_4763	acyl‑CoA thioesterase II/acetyltransferase

AGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATGGGCAGGCGGGG  >  NC_002947/5422706‑5423003                                                                                                                                                     |                                                                                                                                                      aGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAa                                                                                                                                                      >  1:1130550‑M2/1‑149 (MQ=255)       tcctcGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAagcgcct                                                                                                                                                <  2:840298‑M2/150‑8 (MQ=255)                gATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAg                                                                                                                                       <  1:670590/150‑1 (MQ=255)                   tCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCa                                                                                                                                    >  1:776172/1‑150 (MQ=255)                     gAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCaaa                                                                                                                                  >  2:983035/1‑150 (MQ=255)                        gCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGa                                                                                                                               >  1:145132/1‑150 (MQ=255)                          tCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAg                                                                                                                                       <  2:690567/140‑1 (MQ=255)                          tCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTATCCGTAGGAGAGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAg                                                                                                                                       >  1:690567/1‑140 (MQ=255)                            aaCAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGGGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACa                                                                                                                           >  1:253096/1‑150 (MQ=255)                            aaCAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACa                                                                                                                           >  2:590750/1‑150 (MQ=255)                                 gTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGtt                                                                                                                      >  1:288202/1‑150 (MQ=255)                                  tCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGttt                                                                                                                     <  2:1120159/150‑1 (MQ=255)                                      ccAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCaa                                                                                                                                           >  1:451716/1‑124 (MQ=255)                                      ccAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCaa                                                                                                                                           <  2:451716/124‑1 (MQ=255)                                      ccAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCa                                                                                                                 >  2:982702/1‑150 (MQ=255)                                                cAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCtt                                                                                                                                               <  1:270319/110‑1 (MQ=255)                                                cAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCtt                                                                                                                                               >  2:270319/1‑110 (MQ=255)                                                 aaCACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCgg                                                                                                       <  1:235021/149‑1 (MQ=255)                                                 aaCACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCgg                                                                                                       >  2:235021/1‑149 (MQ=255)                                                 aaCACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCgg                                                                                                       >  2:234928/1‑149 (MQ=255)                                                 aaCACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCgg                                                                                                       <  1:234928/149‑1 (MQ=255)                                                     caTGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATg                                                                                                  >  1:611728/1‑150 (MQ=255)                                                          cTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCtgt                                                                                             <  1:982702/150‑1 (MQ=255)                                                             aTCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCACCCACCAAATAAACACATGTTAGAGCGTAGGTCATTCGCACCGGGCATGGCTGTGCa                                                                                          >  2:121709/1‑150 (MQ=37)                                                                           gTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAgg                                                                            <  1:983035/150‑1 (MQ=255)                                                                           gTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAgg                                                                            <  2:611728/150‑1 (MQ=255)                                                                            tAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCtgt                                                                                             >  1:408894/1‑132 (MQ=255)                                                                            tAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCtgt                                                                                             <  2:408894/132‑1 (MQ=255)                                                                              ggAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTg                                                                         <  1:1039130/150‑1 (MQ=255)                                                                                    agcCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTcc                                                                   <  2:776172/150‑1 (MQ=255)                                                                                    agcCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTcc                                                                   >  2:744982/1‑150 (MQ=255)                                                                                    agcCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTcc                                                                   >  2:1054665/1‑150 (MQ=255)                                                                                        tAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGt                                                               <  1:3367/150‑1 (MQ=255)                                                                                                      ccgccCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATg                                                 <  1:651746/150‑1 (MQ=255)                                                                                                      ccgccCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATg                                                 >  1:286190/1‑150 (MQ=255)                                                                                                         cccGAGCGGCGCTCGATTTCACAGCCGCGTTTTGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCgg                                              <  1:840298/150‑1 (MQ=255)                                                                                                              gcggcgCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAg                                         <  2:327868/150‑1 (MQ=255)                                                                                                                  cgcTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGcaca                                     <  2:253096/150‑1 (MQ=255)                                                                                                                    cTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCAt                                                                                         >  1:677746/1‑96 (MQ=255)                                                                                                                    cTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCAt                                                                                         <  2:677746/96‑1 (MQ=255)                                                                                                                       gATTTCACAGGCGCTGAACGTGTTACGGGCAagcgcctgtgaaatcgagcgccgctcgggcggcgcatcgcgagctaggctcgctcctacggagaaccgccgatgagtcatgtgttggacgacctggtcgacctgttgagcctc                                      <  1:488328‑M2/144‑114 (MQ=255)                                                                                                                       gATTTCACAGGCGCTGAACGTGTTACGGGCAagcgcctgtgaaatcgagcgccgctcgggcggcgcatcgcgagctaggctcgctcctacggagaaccgccgatgagtcatgtgttggacgacctggtcgacctgttgagcctc                                      >  2:488328‑M2/1‑31 (MQ=255)                                                                                                                         tttCACAGGCGCTGAACGTGTTACGGGCAagcgcctgtgaaatcgagcgccgctcgggcggcgcatcgcgagctaggctcgctcctacggagaaccgccgatgagtcatgtgttggacgacctggtcgacctgttgagcctcgaa                                   >  2:6100‑M2/1‑29 (MQ=255)                                                                                                                         tttCACAGGCGCTGAACGTGTTACGGGCAagcgcctgtgaaatcgagcgccgctcgggcggcgcatcgcgagctaggctcgctcctacggagaaccgccgatgagtcatgtgttggacgacctggtcgacctgttgagcctcgaa                                   <  1:6100‑M2/145‑117 (MQ=255)                                                                                                                             acaGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAg                          >  1:868414/1‑150 (MQ=255)                                                                                                                             acaGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAg                          <  1:724417/150‑1 (MQ=255)                                                                                                                                ggCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCgg                       <  1:590750/150‑1 (MQ=255)                                                                                                                                ggCGCTGAACGGGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGGGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCgg                       <  2:462471/150‑1 (MQ=255)                                                                                                                                      gAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTATCATTCGCACCGGGCATGGCTGTGCTTTCTGGCGCGCAAGGTGCAGTGTCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGcc                 >  2:821063/1‑150 (MQ=255)                                                                                                                                          gtgtTACGGGCAAGCGGCGTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGGGTGCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATg             <  2:427509/150‑1 (MQ=255)                                                                                                                                           tgtTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATgg            <  1:540094/150‑1 (MQ=255)                                                                                                                                           tgtTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATgg            <  2:288202/150‑1 (MQ=255)                                                                                                                                                 gggCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATGGGCAGGc      <  1:479511/150‑1 (MQ=255)                                                                                                                                                     aaGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATGGGCAGGCgggg  <  2:145132/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      AGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATGGGCAGGCGGGG  >  NC_002947/5422706‑5423003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.