New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5646682 =	57 (1.320)	3 (0.070)	3/246	NT	5.7%	coding (1984/2184 nt)	PP_4954	membrane protein
	?	NC_002947	5646714 =	45 (1.070)					coding (2016/2184 nt)	PP_4954	membrane protein

CTCAGCTACCTCTCGGGGTTAGGCGCGCACCGCGACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGCCGGCAGCTGGGGCCACTGCGGAC  >  NC_002947/5646568‑5646842                                                                                                                                                     |                                                                                                                                 cTCAGCTACCTCTCGGGGTTAGGCGCGCACCGCGACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGAtt                                                                                                                               <  2:358178/150‑1 (MQ=255)    aGCTACCTCTCGGGGTTAGGCGCGCACCGCGACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTcac                                                                                                                            >  2:843707/1‑150 (MQ=255)       tACCTCTCGGGGTTAGGCGCGCACCGCGACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGt                                                                                                                         <  2:817014/150‑1 (MQ=255)         ccTCTCGGGGTTAGGCGCGCACCGCGACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGTCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGa                                                                                                                       <  2:1003481/150‑1 (MQ=255)         ccTCTCGGGGTTAGGCGCGCACCGCGACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGa                                                                                                                       <  2:1003415/150‑1 (MQ=255)              tatcaacgccagctgcgtctgcaccaaccgctgatgctcatccagatcttccggcatctgctccagggcattggccaacgcctcttcggaatcactgtgaatcgccaacggcctggccgcgcggctgccggtggcGATTCACAGTGATTc                                                                                                                    <  2:888527‑M2/15‑1 (MQ=255)                gggTTAGGCGCGCACCGCGACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGaa                                                                                                                >  1:410666/1‑150 (MQ=255)                   ttAGGCGCGCACCGCGACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAagag                                                                                                             <  2:1066599/150‑1 (MQ=255)                   ttAGGCGCGCACCGCGACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAagag                                                                                                             >  2:688387/1‑150 (MQ=255)                           gcACCGCGACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAAGGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGc                                                                                                     <  2:499737/150‑1 (MQ=255)                               cgcgACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCNAAt                                                                                                 <  2:703517/150‑1 (MQ=255)                               cgcgACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAAt                                                                                                 >  2:190138/1‑150 (MQ=255)                                     acGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTg                                                                                           <  1:268511/150‑1 (MQ=255)                                          gTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCa                                                                                      <  1:1069708/150‑1 (MQ=255)                                          gTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCa                                                                                      <  1:659998/150‑1 (MQ=255)                                          gTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCa                                                                                      <  1:659577/150‑1 (MQ=255)                                               aaGCCGAGGTGCAGGAGCAGTTTATCGAAGACGCCGGGCAAAGGCTGGCCAGCTGCCTGGTTGAAATTGCCAACGGCCTTGTTGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGc                                                                                 <  1:459750/149‑1 (MQ=255)                                                aGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGcc                                                                                <  2:671163/150‑1 (MQ=255)                                                   atccagatcttccggcatctgctccagggcattggccaacgcctcttcggaatcactgtgaatcGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGAt                                                                                                                                <  2:555263‑M1/35‑1 (MQ=255)                                                   atccagatcttccggcatctgctccagggcattggccaacgcctcttcggaatcactgtgaatcGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGAt                                                                                                                                >  1:555263‑M1/65‑99 (MQ=255)                                                    gAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGaa                                                                            <  2:867376/150‑1 (MQ=255)                                                    gAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGaa                                                                            <  2:410666/150‑1 (MQ=255)                                                      ggTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTcac                                                                                                                            <  2:633281/100‑1 (MQ=255)                                                      ggTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTcac                                                                                                                            >  1:633281/1‑100 (MQ=255)                                                       gTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGAt                                                                         <  2:745673/150‑1 (MQ=255)                                                           aGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGCCAAAATTCCAAACGCCCTGCCCCGGCGCCT‑‑GCCGGGGCGGATTCACAGTGTTTCCGAAGAGGCGTTGGCCAATGCCCGGGACCTGATGCCGAAAAATCTgg                                                                     >  2:1080450/1‑150 (MQ=255)                                                               gCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGTAAGATCTGGATGa                                                                 >  2:57789/1‑150 (MQ=255)                                                                 aGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGc                                                               <  1:190138/150‑1 (MQ=255)                                                                          aaGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGt                                                      >  1:395074/1‑150 (MQ=255)                                                                              cgcCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCACTGCCCTGGACCCGACGCCGGAAGATCTGGATGAGCATCAGCGGTTGGt                                                  <  1:573477/150‑1 (MQ=255)                                                                               gcCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCGGCGCGGCT‑‑TCTGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTg                                                 <  1:807018/150‑1 (MQ=255)                                                                               gcCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGACAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTg                                                 <  1:631483/150‑1 (MQ=255)                                                                                 cGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCa                                               <  1:1082589/150‑1 (MQ=255)                                                                                  gggCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTcc                                                                                                                   >  1:398251/1‑81 (MQ=255)                                                                                  gggCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTcc                                                                                                                   <  2:398251/81‑1 (MQ=255)                                                                                  gggCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAg                                              >  2:14852/1‑150 (MQ=255)                                                                                    gCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACCGTATTTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGAc                                            <  1:688387/150‑1 (MQ=255)                                                                                          ccTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGATGGTGCAGACGCAGCt                                      >  2:568151/1‑150 (MQ=255)                                                                                           cTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTg                                     >  1:125224/1‑150 (MQ=255)                                                                                               ccAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACCGTGATTCCGAAGGGGAGTTTGCCAGGGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGt                                 >  1:979836/1‑150 (MQ=255)                                                                                                cagcagCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGtt                                <  1:495032/150‑1 (MQ=255)                                                                                                    gaatcactgtgaatcGCCACCGGCA‑‑GCCGCGCGGCCAGGCCGTTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGata                            <  2:888527‑M1/135‑1 (MQ=255)                                                                                                       cTGGACGAAATTGCCAACGGCCTGCCCGCGCGCCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAACAGGCGTTGGCCAATCCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGc                         >  2:507634/1‑150 (MQ=255)                                                                                                        tGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGtt                                <  1:83886/142‑1 (MQ=255)                                                                                                        tGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGtt                                >  2:83886/1‑142 (MQ=255)                                                                                                             gAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGCCGGCAg                   >  1:636022/1‑150 (MQ=255)                                                                                                                  atcgccaccggcagccgcgcggccaggccgttggcGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGAt                                                                   <  2:555263‑M2/64‑1 (MQ=255)                                                                                                                  atcgccaccggcagccgcgcggccaggccgttggcGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGAt                                                                   >  1:555263‑M2/36‑99 (MQ=255)                                                                                                                    CCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGCCGGCAGCTGGGGc            <  2:1111108‑M1/150‑1 (MQ=255)                                                                                                                     CAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGCCGGCAGCTGGGGcc           <  1:495909‑M1/150‑1 (MQ=255)                                                                                                                      AACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGCCGGCACCTGGggcgc          <  2:965449‑M1/150‑3 (MQ=255)                                                                                                                          gCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGCCGGCAGCTGGGGCCACTGc      <  1:1111108/150‑1 (MQ=255)                                                                                                                            cTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGCCGGCAGCTGGGGCCACTGCgg    >  1:232198/1‑150 (MQ=255)                                                                                                                              ggCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGCCGGCAGCTGGGGCCACTGCGGAc  <  1:413316/150‑1 (MQ=255)                                                                                                                              ggCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGCCGGCAGCTGGGGCCACTGCGGAc  <  2:125224/150‑1 (MQ=255)                                                                                                                                                gTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGcc                        <  1:574803/112‑1 (MQ=255)                                                                                                                                                gTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGcc                        >  2:574803/1‑112 (MQ=255)                                                                                                                                                    cGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCggtgg                                                    >  1:247341‑M2/2‑78 (MQ=255)                                                                                                                                                    cGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTg                                                    <  2:247341‑M2/79‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                 CTCAGCTACCTCTCGGGGTTAGGCGCGCACCGCGACACGGCGTTGCCAGCCGAGGTGCAGGAGCAGTTGATCGAAGGCGCCGGGCAAAGCCTGGCCAGCAGCCTGGACGAAATTGCCAACGGCCTGGCCGCGCGGCT‑‑GCCGGTGGCGATTCACAGTGATTCCGAAGAGGCGTTGGCCAATGCCCTGGAGCAGATGCCGGAAGATCTGGATGAGCATCAGCGGTTGGTGCAGACGCAGCTGGCGTTGATATGCCGGCAGCTGGGGCCACTGCGGAC  >  NC_002947/5646568‑5646842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.