New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5756714 =	58 (1.340)	4 (0.100)	4/236	NT	6.8%	intergenic (+335/‑353)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
	?	NC_002947	5756788 =	56 (1.390)					intergenic (+409/‑279)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase

CGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAG  >  NC_002947/5756640‑5756935                                                                                                                                                     |                                                                                                                                                    cGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAaga                                                                                                                                                    <  1:1086369/150‑1 (MQ=255) cGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAaga                                                                                                                                                    <  1:508093/150‑1 (MQ=255)  gggtttacccgagaatacggtgggggtgccaacgcggaacggcaggtggagattggccagctggcccggcctcTTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAagag                                                                                                                                                   >  1:976076‑M1/74‑150 (MQ=255)          ccGCGCAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGcc                                                                                                                                           >  2:130268/1‑150 (MQ=255)              gAAGAGGCCGCGCCTGCCGGCCACTCTCTCCCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCctgct                                                                                                                                       <  2:816295/150‑1 (MQ=255)                    gCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGCTCACCCGCGAAGAGGCCGGGCCCGCTGGCCaa                                                                                                                                 >  2:658790/1‑150 (MQ=255)                     ccGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAAt                                                                                                                                <  1:106424/150‑1 (MQ=255)                      cgctCCTGCCCGCCAATCCCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAACCCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAAtc                                                                                                                               <  2:383064/150‑1 (MQ=17)                       gcgcCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAAtct                                                                                                                              >  1:655193/1‑150 (MQ=255)                       gcgcCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCCGGTTCACCCGCGAAGAGGCCGGGCCGGCTGGCCAAtcg                                                                                                                              >  2:114997/1‑149 (MQ=255)                           ctgctgGCCACTCCCCCCCTGCCGTTCAGCGTTGCCGCCGCCACTGTACTCGCGGGTACGCCCGCTCCTACCAGGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCAc                                                                                                                          <  2:409034/150‑1 (MQ=17)                           ctgctgGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCAc                                                                                                                          >  1:839276/1‑150 (MQ=255)                              ctgGCCAACCTCCACCTTCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTg                                                                                                                       <  2:280589/150‑1 (MQ=255)                               tgGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTTGTACCGCGGCGTGGACACACATCACGAGCGTCGTAGGAGCGGGTTCAGCCGCGAAGAGCCGGTGCCGGCTGGCCAATCTCCACCtcc                                                                                                                      >  2:529128/1‑148 (MQ=17)                                  ccAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGt                                                                                                                   <  1:130268/150‑1 (MQ=255)                                   cAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGtt                                                                                                                  <  1:187517/150‑1 (MQ=255)                                   cAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGtt                                                                                                                  >  2:916028/1‑150 (MQ=255)                                          cACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGtt                                                                                                           <  1:396851/150‑1 (MQ=255)                                                       gCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCg                                                                                              >  1:771856/1‑150 (MQ=255)                                                          ttGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACAGGGCGGGCGTCGTAGGAGCGGGCTCACCCGCGAAGAGGCCGGGCCTGCTGGGCAATCTCCACCTGCCGTTCAGCGTAGCCGCCACCCCCGTaa                                                                                           >  2:230329/1‑149 (MQ=17)                                                             ccgccgccACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTcg                                                                                        >  1:962942/1‑150 (MQ=255)                                                                ccgccgccgTATCCGCGGGTAACCCCGCTCCTCCCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCgg                                                                                     <  2:1069512/150‑1 (MQ=255)                                                                        ctcttcgcgggtgaacccgctcctacgacgaccgcgatgtgtgtccacgccgtggtaggagcgggtttacccgcgaaGAGGCCGGGCCAGCTGGCCAATCTCCACCTGCCGTTCCGCGTTGGCACCCCCACCGTATTCTCGGGTAAAccc                                                                             >  1:976076‑M2/78‑150 (MQ=255)                                                                            TCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCtt                                                                         >  1:553405‑M1/1‑150 (MQ=255)                                                                               cgatctaaCCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACGCCGCTTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTa                                                                      <  1:577549/144‑1 (MQ=17)                                                                                   TAANCCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGt                                                                  <  2:696557‑M1/150‑1 (MQ=255)                                                                                       cccGCTCGTACGACGGGGTGGCCACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGa                                                              <  2:951019/150‑1 (MQ=255)                                                                                       cccGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGccacca                                                                                                 >  2:318299/1‑115 (MQ=255)                                                                                       cccGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGccacca                                                                                                 <  1:318299/115‑1 (MQ=255)                                                                                       cccGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGa                                                              >  2:212194/1‑150 (MQ=255)                                                                                       cccGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGa                                                              >  1:645273/1‑150 (MQ=255)                                                                                       cccGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGa                                                              >  1:530274/1‑150 (MQ=255)                                                                                       cccGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGa                                                              <  1:916028/150‑1 (MQ=255)                                                                                        ccgctcctacgacgaccgcgatgtgtgtccacgccgtggtaggagcgggtttacccgcgaaGAGGCCGGGCCTGCTGGCCAATCTCCACCTGcc                                                                                                                     <  1:522019‑M2/33‑1 (MQ=255)                                                                                        ccgctcctacgacgaccgcgatgtgtgtccacgccgtggtaggagcgggtttacccgcgaaGAGGCCGGGCCTGCTGGCCAATCTCCACCTGcc                                                                                                                     >  2:522019‑M2/62‑94 (MQ=255)                                                                                        ccGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGAc                                                             >  1:812754/1‑150 (MQ=255)                                                                                        ccGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGAc                                                             >  1:557943/1‑150 (MQ=255)                                                                                        ccGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACACCTGAAGAGTCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGAc                                                             >  2:705865/1‑150 (MQ=255)                                                                                        ccGCTCCTACCACGGCGTGGACACACATCGCGGTCGCCGTACGAGCGGGGTCACCCGCGAAGAGGCCGGGCCTGCCGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCCTGTATGGTAGGAc                                                             >  1:170781/1‑150 (MQ=18)                                                                                         cGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACt                                                            >  1:28601/1‑150 (MQ=255)                                                                                            tcctacgacgaccgcgatgtgtgtccacgccgtggtaggagcgggttcacccgcgaaGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGa                                                         >  1:721099‑M2/58‑150 (MQ=255)                                                                                              cTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAg                                                       >  1:999965/1‑150 (MQ=255)                                                                                               tACCACGGCGTGGACACACATCGCGGTCGTCGTAGTAGCGGGTTCACCCGCGAAGAGGCCGTGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAgg                                                      <  1:543676/150‑1 (MQ=255)                                                                                               tACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAgg                                                      <  2:962942/150‑1 (MQ=255)                                                                                                 ccACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTg                                                                                                          <  1:340395/96‑1 (MQ=255)                                                                                                 ccACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTg                                                                                                          >  2:340395/1‑96 (MQ=255)                                                                                                 ccACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTGAACCCGCTTGTATGGTAGGACTTGAAGgga                                                    <  2:655193/150‑1 (MQ=255)                                                                                                    cGGCGTGGACCCACATCGCGGTCGTCGTAGGAGCGGGGACCCCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGggagga                                                 <  1:607742/150‑1 (MQ=255)                                                                                                    cGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGggagga                                                 <  1:114997/150‑1 (MQ=255)                                                                                                     ggCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGggaggag                                                <  1:529128/150‑1 (MQ=255)                                                                                                           gACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGc                                          >  1:255437/1‑150 (MQ=255)                                                                                                            acacacATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAgg                                                      <  2:1001642/137‑1 (MQ=255)                                                                                                            acacacATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAgg                                                      >  1:1001642/1‑137 (MQ=255)                                                                                                            acacacATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGcc                                         >  1:600791/1‑150 (MQ=255)                                                                                                               cacaTCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATa                                      >  2:803430/1‑150 (MQ=255)                                                                                                                  aTCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACt                                   >  1:744698/1‑150 (MQ=255)                                                                                                                   tCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTa                                                                 <  1:595300/119‑1 (MQ=255)                                                                                                                   tCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTa                                                                 >  2:595300/1‑119 (MQ=255)                                                                                                                     gtggTCGGCGTAGGAGCGGCTTCCCCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGc                                <  2:69562/148‑1 (MQ=255)                                                                                                                     gcgGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGc                                <  1:292183/150‑1 (MQ=255)                                                                                                                     gcgGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGc                                <  2:600791/150‑1 (MQ=255)                                                                                                                              gtAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGtt                                                                                                           <  2:734110/66‑1 (MQ=37)                                                                                                                               tAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGt                      <  2:771856/150‑1 (MQ=255)                                                                                                                                 ggAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTc                    <  1:443516/150‑1 (MQ=255)                                                                                                                                 ggAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTc                    <  2:839276/150‑1 (MQ=255)                                                                                                                                        gTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGc                                                                           >  2:367072/1‑88 (MQ=40)                                                                                                                                        gTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGc                                                                           <  1:367072/88‑1 (MQ=40)                                                                                                                                           cACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACa          <  1:803430/150‑1 (MQ=255)                                                                                                                                            acccgcgaaGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCgg                                                                                     <  2:347842‑M2/65‑1 (MQ=255)                                                                                                                                              ccgcgaaGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTa                                                                 <  1:423048‑M2/85‑1 (MQ=255)                                                                                                                                              ccgcgaaGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTa                                                                 >  2:423048‑M2/8‑92 (MQ=255)                                                                                                                                                   aaGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATACCTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAg  <  2:999965‑M2/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAG  >  NC_002947/5756640‑5756935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.