New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5877040 =	57 (1.320)	5 (0.140)	5/206	NT	10.6%	intergenic (+6/+99)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	5877122 =	38 (1.080)					intergenic (+88/+17)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein

GCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTGCGCAAC  >  NC_002947/5876974‑5877271                                                                                                                                                     |                                                                                                                                                       gccggcGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACa                                                                                                                                                       <  1:128984/150‑1 (MQ=255)     gcggATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGGAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGcc                                                                                                                                                   >  1:29037/1‑150 (MQ=255)           ctgctgctgctgGGCACCGCTGAAGGCTTGAAGAGCGTGAAGGCCGAGTAAAACCCTTCGCGGGTACATGCACCCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACa                                                                                                                                             <  1:1040316/150‑1 (MQ=255)              ctgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGc                                                                                                                                          <  1:342560/150‑1 (MQ=255)                            cGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCgg                                                                                                                            >  2:887908/1‑150 (MQ=255)                              cTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgct                                                                                                                          >  1:1099770/1‑150 (MQ=255)                               tGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctg                                                                                                                         >  2:305864/1‑150 (MQ=255)                                 aaGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctgct                                                                                                                       <  1:855353/150‑1 (MQ=255)                                  aGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTCCCCACCCGGAATGCAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCtt                                                                                                                      <  1:688468/150‑1 (MQ=255)                                  aGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCTCCCCGGCATGAGTCCGTGGCGATCCCGGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCtt                                                                                                                      <  1:688511/150‑1 (MQ=255)                                  aGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCtt                                                                                                                      <  1:887908/150‑1 (MQ=255)                                       tGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGAc                                                                                                                                              <  1:902407/121‑1 (MQ=255)                                       tGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGAc                                                                                                                                              >  2:902407/1‑121 (MQ=255)                                         aaGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAAcaca                                                                                                               >  2:144769/1‑150 (MQ=255)                                           gagCCTGAAGGCCGAGTAAAACCCTTCATTCGAAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATa                                                                                                             >  1:578007/1‑150 (MQ=255)                                            agCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAg                                                                                                            >  2:302706/1‑150 (MQ=255)                                             gCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGa                                                                                                           <  1:376413/150‑1 (MQ=255)                                              ccTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa                                                                                                                   >  2:51942/1‑141 (MQ=255)                                              ccTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa                                                                                                                   <  1:51942/141‑1 (MQ=255)                                              ccTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATAAGGCAGTCGGCTGCTTGAACACATAGaa                                                                                                          >  1:840389/1‑150 (MQ=255)                                               cTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAAc                                                                                                         >  2:172696/1‑150 (MQ=255)                                               cTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAAc                                                                                                         <  1:305864/150‑1 (MQ=255)                                                 gAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAg                                                                                                       >  1:396996/1‑150 (MQ=255)                                                 gAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAg                                                                                                       <  2:189446/150‑1 (MQ=255)                                                 gAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCATCCCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAg                                                                                                       <  1:345998/150‑1 (MQ=255)                                                     gCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTc                                                                                                   >  2:413582/1‑150 (MQ=255)                                                       cGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCgg                                                                                                 <  1:179504/150‑1 (MQ=255)                                                        gAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGccc                                                                                                                                                  <  2:759744/100‑1 (MQ=255)                                                        gAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGccc                                                                                                                                                  >  1:759744/1‑100 (MQ=255)                                                           tAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTAACCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTCCTTGAACACATAGAACAGGTTCGGCTC‑a                                                                                            <  1:30468/150‑1 (MQ=255)                                                             aaaCCCTTCGCGGGTCAACGCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACt                                                                                          <  2:1105623/150‑1 (MQ=255)                                                             aaaCCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACt                                                                                          <  1:647845/150‑1 (MQ=255)                                                                         ggtaaacccgctcctacagggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaaCAGTCCCTGACAGGCGAtca                                                                                                                                     >  2:771055‑M2/77‑96 (MQ=255)                                                                         ggtaaacccgctcctacagggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaaCAGTCCCTGACAGGCGAtca                                                                                                                                     <  1:771055‑M2/20‑1 (MQ=255)                                                                         GGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGc                                                                                                                                                    <  2:1046892‑M1/81‑1 (MQ=255)                                                                         GGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGc                                                                                                                                                    >  1:1046892‑M1/1‑81 (MQ=255)                                                                         GGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAAt                                                                              <  2:195743‑M1/150‑1 (MQ=255)                                                                          GTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATg                                                                             >  1:172696‑M1/1‑150 (MQ=255)                                                                              ACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTT‑ACTGACCAGGTAAATGGTcc                                                                         <  1:1027570‑M1/150‑1 (MQ=255)                                                                               CCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca                                                                                                                                     <  1:1085789‑M1/90‑1 (MQ=255)                                                                               CCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca                                                                                                                                     >  2:1085789‑M1/1‑90 (MQ=255)                                                                               CCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTccc                                                                        <  1:649369‑M1/150‑1 (MQ=255)                                                                                ccgctcctacagggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaaCAGGCCCTGACAGGc                                                                                                                                          <  2:937553‑M2/15‑1 (MQ=255)                                                                                ccgctcctacagggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaaCAGGCCCTGACAGGc                                                                                                                                          >  1:937553‑M2/70‑84 (MQ=255)                                                                                       TACAAGGTACCCCCCCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCAt                                                                >  1:369044‑M1/1‑150 (MQ=255)                                                                                       TACAAGGTACCCCACCGGCCTGGAACAGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCAt                                                                <  2:563296‑M1/150‑1 (MQ=255)                                                                                        ACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATc                                                               <  1:950590‑M1/150‑1 (MQ=255)                                                                                        ACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATc                                                               <  1:950392‑M1/150‑1 (MQ=255)                                                                                            ggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTcatccatc                                                           >  1:652177‑M2/58‑150 (MQ=255)                                                                                            ggTACCCCACGGGCCTGGAACGGTGGCGATCACTGTAGGAGCGGGTTTACCAGGGAACAGGCCCTGACAGGCGATAAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTGCCCGCGTcctccacc                                                           >  2:474322/1‑148 (MQ=255)                                                                                                 cccNCCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAAt                                                      >  2:694823/1‑150 (MQ=255)                                                                                                               aCCTTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCg                                        <  1:229673/150‑1 (MQ=255)                                                                                                               aCCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCg                                        <  1:413582/150‑1 (MQ=255)                                                                                                                   tGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGa                                                                                                                                               <  1:864458/44‑1 (MQ=255)                                                                                                                   tGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGa                                                                                                                                               >  2:864458/1‑44 (MQ=255)                                                                                                                    ggCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCAcc                                   <  2:978157/150‑1 (MQ=255)                                                                                                                         tCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGc                              <  1:694823/150‑1 (MQ=255)                                                                                                                           ccTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCt                            <  2:649369/150‑1 (MQ=255)                                                                                                                           ccTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCt                            >  1:696152/1‑150 (MQ=255)                                                                                                                            cTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTg                           >  1:489690/1‑150 (MQ=255)                                                                                                                                     cgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTg                  <  2:1027570‑M2/134‑1 (MQ=255)                                                                                                                                            acccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAAccc           <  1:837791‑M2/141‑1 (MQ=255)                                                                                                                                             cccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCt                   <  2:700541‑M2/133‑1 (MQ=255)                                                                                                                                             cccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCt                   >  1:700541‑M2/9‑141 (MQ=255)                                                                                                                                             cccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCt          <  1:302706‑M2/142‑1 (MQ=255)                                                                                                                                              ccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCtt         >  1:3899‑M2/8‑150 (MQ=255)                                                                                                                                                   aaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAAc             >  2:23802‑M2/3‑141 (MQ=255)                                                                                                                                                   aaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAAc             <  1:23802‑M2/139‑1 (MQ=255)                                                                                                                                                     cAGGCCCTGACAGGCGATCAGTCAGTCGGCTTCTCGAACAAATAGTGGCGATGC‑GCTCGACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTGCGCAAc  <  2:578007/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                       GCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTC‑ACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTGCGCAAC  >  NC_002947/5876974‑5877271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.