Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,888,482 T→A 9.2% E611D (GAA→GAT PP_1695 ← sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,888,4820TA 9.2% 137.6 / 5.3 52E611D (GAA→GATPP_1695sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
Reads supporting (aligned to +/- strand):  ref base T (24/23);  new base A (3/2);  total (27/25)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.77e-01

AGGCCACCAGGTGCAGGTTCTGGTCGACCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGTAGGCAAAGCGGATGAAGCTCTG  >  NC_002947/1888334‑1888631
                                                                                                                                                    |                                                                                                                                                     
aGGCCACCAGGTGCAGGTTCTGGTCGACCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCtt                                                                                                                                                      >  1:387623/1‑150 (MQ=255)
    caccgGGTGCAGGGTCTGGTCGACCACGCTGATGCCATGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGAt                                                                                                                                                  <  2:81884/150‑1 (MQ=255)
    caccaGGTGCAGGTTCTGGTCGACCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGAt                                                                                                                                                  >  2:393310/1‑150 (MQ=255)
     accaGGTGCAGGTTCTGGTCGACCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATg                                                                                                                                                 >  2:847752/1‑150 (MQ=255)
     accaGGTGCAGGTTCTGGTCGACCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATg                                                                                                                                                 >  2:149604/1‑150 (MQ=255)
        aGGTGCAGGTTCTGGTCGACCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGgcc                                                                                                                                              <  1:1127150/150‑1 (MQ=255)
          gTGCGGGTTCTGGTCGCCCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTTGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGgccgc                                                                                                                                            <  2:457204/150‑1 (MQ=255)
          gTGCAGGTTCTGGTCGACCACGCTGATGCCTTGGTTGATGTTCTCGCTGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCATTTGCATGTCGCGGCCTTCGATGgccgc                                                                                                                                            >  2:87213/1‑150 (MQ=255)
          gTGCAGGTTCTGGTCGACCACGCTGATGCCTTGGTTGATGGTCTCGATGGCGCCTTGGAGCCGGGAGCGGTTTCACTTCAGCACCTCACTGCCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCATTCGATGgccgc                                                                                                                                            >  2:92670/1‑150 (MQ=255)
                    tGGTCGACCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTCaccacc                                                                                                                                  >  2:305678/1‑150 (MQ=255)
                      gTCGACCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACcgc                                                                                                                                >  1:508880/1‑150 (MQ=255)
                      gTCGACCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACcgc                                                                                                                                >  2:377090/1‑150 (MQ=255)
                          aCCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTCACCACCGCGCgg                                                                                                                            >  1:445451/1‑150 (MQ=255)
                            cACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGt                                                                                                                          >  1:777211/1‑150 (MQ=255)
                             aCGCTGATGGCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGCCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTc                                                                                                                         <  1:220040/150‑1 (MQ=255)
                                cTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTcgac                                                                                                                      <  1:546324/150‑1 (MQ=255)
                                        ttGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTAcc                                                                                                              >  1:353477/1‑150 (MQ=255)
                                           gTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAg                                                                                                           >  1:977484/1‑150 (MQ=255)
                                             tGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATgg                                                                                                                                                >  1:876220/1‑111 (MQ=255)
                                             tGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATgg                                                                                                                                                <  2:876220/111‑1 (MQ=255)
                                             tGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCa                                                                                                         <  2:353477/150‑1 (MQ=255)
                                                 gTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCCATGGCTTAGCCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCAcccc                                                                                                     >  2:830992/1‑150 (MQ=255)
                                                   tctcGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCAcc                                                                                                       >  2:527009/1‑146 (MQ=255)
                                                   tctcGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCAcc                                                                                                       <  1:527009/146‑1 (MQ=255)
                                                    ctcGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTCCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGc                                                                                                  <  2:367992/150‑1 (MQ=255)
                                                     tcGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGcc                                                                                                 >  1:35630/1‑150 (MQ=255)
                                                          ggCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCACGGCcagcag                                                                                            <  2:777211/150‑1 (MQ=255)
                                                                   cagcagGGCGCGGTTGAACCGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGgt                                                                                   <  1:542572/150‑1 (MQ=255)
                                                                    agcagGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGgtg                                                                                  <  1:1003039/150‑1 (MQ=255)
                                                                        gggCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATTGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCt                                                                              >  2:135135/1‑150 (MQ=255)
                                                                           cgcgGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGa                                                                           <  1:377090/150‑1 (MQ=255)
                                                                              ggTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATcc                                                                        >  2:677159/1‑150 (MQ=255)
                                                                              ggTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATcc                                                                        >  2:989270/1‑150 (MQ=255)
                                                                                                     gCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCATCGAGGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGGCGCCATCGGCGTTCTGGTTa                                                 >  2:432801/1‑150 (MQ=255)
                                                                                                       ttCGTCAGCGATGCGCACCACGTCTTCCAGTTGTATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAgg                                               >  2:335864/1‑150 (MQ=255)
                                                                                                       ttCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTggg                                               <  2:35630/150‑1 (MQ=255)
                                                                                                       ttCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGGTAgg                                               <  1:830992/150‑1 (MQ=255)
                                                                                                           tCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTg                                           >  2:710594/1‑150 (MQ=255)
                                                                                                              gCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGaaa                                        <  1:393310/150‑1 (MQ=255)
                                                                                                                 aTGCGCACCACGTCTTCCAGTTGTATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAAccc                                     <  1:335864/150‑1 (MQ=255)
                                                                                                                         cacGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTg                             >  1:169593/1‑150 (MQ=255)
                                                                                                                           cGTCTTCCAGTTGCAGGCCGCGGACTTCGAGGGCCGCCTTGACCCCCGCGCGTCTCGACGAGGTACCCAGCACCCCGGCCAGCAGGCGCTCGGGGTGCTCGAGCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAACCCCTTGCCCTGGc                           <  2:236374/150‑1 (MQ=255)
                                                                                                                              cTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGt                        <  2:977484/150‑1 (MQ=255)
                                                                                                                                tCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGTAg                      <  1:149604/150‑1 (MQ=255)
                                                                                                                                tCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGTAg                      <  1:847752/150‑1 (MQ=255)
                                                                                                                                    gTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGTAGGCaa                  <  1:17794/150‑1 (MQ=255)
                                                                                                                                         aTGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGTAGGCAAAGCgg             >  1:794014/1‑150 (MQ=255)
                                                                                                                                          tGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGTAGGCAAAGCGGa            <  1:677159/150‑1 (MQ=255)
                                                                                                                                           aaggcgGCCATCGAAGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCg                                                             >  2:848183/4‑100 (MQ=255)
                                                                                                                                           aaggcgGCCATCGAAGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCg                                                             <  1:848183/97‑1 (MQ=255)
                                                                                                                                             ggcgGCCATCGAAGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCg                          >  2:941463/2‑133 (MQ=255)
                                                                                                                                             ggcgGCCATCGAAGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCg                          <  1:941463/132‑1 (MQ=255)
                                                                                                                                              gcgGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGTAGGCAAAGCGGATGaa        >  2:958493/1‑150 (MQ=255)
                                                                                                                                                    ttCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGTAGGCAAAGCGGATGAAGCTCTg  <  1:540231/150‑1 (MQ=255)
                                                                                                                                                    ttCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGTAGGCAAAGCGGATGAAGCTCTg  >  2:417269/1‑150 (MQ=255)
                                                                                                                                                    ttCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGTAGGCAAAGCGGATGAAGCTCTg  >  1:1003686/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
AGGCCACCAGGTGCAGGTTCTGGTCGACCACGCTGATGCCTTGGTTGATGTTCTCGATGGCGCCTTGCAGCAGGGCGCGGTTGAACTGCAGCACCTCACTGGCTTCGTCAGCGATGCGCACCACGTCTTCCAGTTGCATGTCGCGGCCTTCGATGGCCGCCTTGACCACCGCGCGGGTCGACGAGGTACCGAGCACCCCGGCCAGCAGGCGCTCGGTGTGCTCGATCCAGTCGCCATCGGCGTTCTGGTTAGGGTTGAAACCCTTGCCCTGGCGGTAGGCAAAGCGGATGAAGCTCTG  >  NC_002947/1888334‑1888631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: