| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,964,757 | A→T | 6.7% | Q309L (CAG→CTG) | yegE → | phosphodiesterase domain‑containing diguanylate cyclase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,964,757 | 0 | A | T | 6.7% | 226.3 / 6.1 | 75 | Q309L (CAG→CTG) | yegE | phosphodiesterase domain‑containing diguanylate cyclase |
| Reads supporting (aligned to +/- strand): ref base A (40/30); new base T (2/3); total (42/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.27e-01 | |||||||||||
CCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGT > NC_002947/1964610‑1964906 | ccAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGCGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAgg > 2:433480/1‑150 (MQ=255)ccAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCTgg < 1:143595/150‑1 (MQ=255) ccgcCCTGCAGCAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTTATTATAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGCTGATCCGCAGGCAATCCGGCCAGGCCCAGGGcc < 1:759101/149‑1 (MQ=255) gcCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGCTGTCTCCTTCAATATCGGCGTGATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTg < 1:411559/150‑1 (MQ=255) cccTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGc < 1:228012/150‑1 (MQ=255) ccTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGcc > 2:232237/1‑150 (MQ=255) aGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGt > 2:472033/1‑150 (MQ=255) agaaAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGc > 1:676055/1‑150 (MQ=255) gCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAg > 1:1108386/1‑150 (MQ=255) gcAGATTACCCTGCAGGCCATCGGGGCTGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCtggt < 2:988199/150‑1 (MQ=255) aTTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGAt < 2:370591/150‑1 (MQ=255) tACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGa < 2:676055/150‑1 (MQ=255) aCCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCTCTGTCGGCACTGTTCAGCCTGGTGGATGAg < 2:1031024/150‑1 (MQ=255) tGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACg > 1:975579/1‑150 (MQ=255) ggCCATCGGGGATGCGGTGATTACACCCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCga < 2:1107695/150‑1 (MQ=255) cATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCgagga > 2:572179/1‑150 (MQ=255) tCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGaggagg > 1:950610/1‑150 (MQ=255) aTGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTc < 2:1036223/150‑1 (MQ=255) gCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGAt > 2:793558/1‑126 (MQ=255) gCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGAt < 1:793558/126‑1 (MQ=255) cGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCa < 2:827901/150‑1 (MQ=255) aTTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTg < 1:232237/150‑1 (MQ=255) ttACAACCGATGTCGAGGGCAATATCGGCTACATTAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCa < 1:625279/108‑1 (MQ=255) ttACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCa > 2:625279/1‑108 (MQ=255) ccGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGc > 2:389949/1‑150 (MQ=255) gATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAg > 2:887548/1‑150 (MQ=255) aTGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAgg < 1:433480/150‑1 (MQ=255) tCGAGGGCAATATCGGCAACATGAACACGGCCGCCGCCCAGTTGACACACAAGCAATCCGACCAGCCCCAGGGCCTGCCCCTGTCGGCACTGTACAGCCTGCTGGATGAGCACGCCGAGGAGGAAGGACGCAGCGTGGTCGCACAGGTGc > 2:239593/1‑150 (MQ=255) gAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTc > 2:615005/1‑150 (MQ=255) aGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCa > 2:1070701/1‑150 (MQ=255) gggCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAg > 1:567368/1‑150 (MQ=255) ggCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGc > 1:197111/1‑150 (MQ=255) gCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGc > 1:887919/1‑144 (MQ=255) gCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGc < 2:887919/144‑1 (MQ=255) cAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCTGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAg > 1:1076136/1‑139 (MQ=255) cAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCTGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAg < 2:1076136/139‑1 (MQ=255) aaTATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGc > 2:888219/1‑150 (MQ=255) ggCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGt > 1:390259/1‑125 (MQ=255) ggCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGt < 2:390259/125‑1 (MQ=255) gCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCa < 2:919660/150‑1 (MQ=255) gCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCa > 1:1107871/1‑150 (MQ=255) cTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCaa > 1:975264/1‑150 (MQ=255) cTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCaa < 2:975579/150‑1 (MQ=255) cccGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTc > 2:940091/1‑150 (MQ=255) cGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCg > 1:180201/1‑150 (MQ=255) cGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCg > 1:737082/1‑150 (MQ=255) ggCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGc < 1:597462/133‑1 (MQ=255) ggCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGa < 2:975264/150‑1 (MQ=255) ggCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGGCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGc > 2:597462/1‑133 (MQ=255) gccgAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCAt < 1:389949/150‑1 (MQ=255) gccgAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCAt > 1:327661/1‑150 (MQ=255) cccgAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCCGTCGGCACTGTTCAGCCTGGCGGGTGAGCACGCCCAGCAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGGCTCAAGGGCGGCTCCAAGCAt > 2:368642/2‑150 (MQ=255) gCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCg < 2:950610/150‑1 (MQ=255) cAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTTTTCAGCCTGGTGGGTGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCgg < 2:607679/150‑1 (MQ=255) cAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCgg > 1:824168/1‑150 (MQ=255) ccACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCa > 1:597821/1‑150 (MQ=255) ccACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCa > 2:356305/1‑150 (MQ=255) ccACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCa < 2:1108386/150‑1 (MQ=255) tGGCAATCCGGCCAGGCCCAGGGCCTTCCGCTGGCGGCACTGTTCAGCCTGGTGGAGGAGCAGATCGGTGCTCATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAgcgc < 1:569642/150‑1 (MQ=255) ggCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGcc > 1:85366/1‑150 (MQ=255) cAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTg < 2:1107871/150‑1 (MQ=255) aaTCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGtt < 2:200488/40‑1 (MQ=255) aaTCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGtt > 1:200488/1‑40 (MQ=255) ggCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTAc < 2:567368/150‑1 (MQ=255) gCCCTGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGa < 1:151896/41‑1 (MQ=255) gCCCTGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGa > 2:151896/1‑41 (MQ=255) gCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTAcc < 2:737082/150‑1 (MQ=255) gCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTAcc < 2:180201/150‑1 (MQ=255) gCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTAcc > 1:1074537/1‑150 (MQ=255) ccAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCgt > 2:157617/1‑150 (MQ=255) ccAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCgt > 1:712642/1‑150 (MQ=255) ccAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCCGCAGCCTCAAGGGCGGCTCCGAGCATGACGGAATGATCCAGCTCTGGGACGGCAGTAACgt > 1:976150/1‑150 (MQ=255) cAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCgtg > 1:1022351/1‑150 (MQ=255) cAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGGAGTCAGTGGCAGCCTCAAGTGCGGCTACGAGCCTGACAGCCTAACTCAGGTCCTGTTCGTCAGTACCgtg > 1:20820/1‑150 (MQ=255) cAGGGCCTGCCGCTGTCGGCACTGTTCAGCCGGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCAAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCgtg > 2:855913/1‑150 (MQ=255) aGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCgtgt < 1:334591/150‑1 (MQ=255) aGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCgtgt < 1:615005/150‑1 (MQ=255) | CCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGT > NC_002947/1964610‑1964906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |