| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,897,768 | T→A | 7.0% | intergenic (+99/‑51) | PP_2551 → / → PP_2552 | LysR family transcriptional regulator/DOPA decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,897,768 | 0 | T | A | 7.0% | 200.9 / 3.4 | 68 | intergenic (+99/‑51) | PP_2551/PP_2552 | LysR family transcriptional regulator/DOPA decarboxylase |
| Reads supporting (aligned to +/- strand): ref base T (30/33); new base A (2/3); total (32/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GCGCCAGTCGCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGACCGTGGGCGAACGCCCGGTCATGGCCCAG > NC_002947/2897621‑2897914 | gcgcCAGTCGCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCCTTGTGTTGATTGTTCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTAc > 2:78421/1‑150 (MQ=255)gcgcCAGTCGCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTAc > 2:788514/1‑150 (MQ=255) ccAGTCGCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCcg > 1:254548/1‑150 (MQ=255) gTCGCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCcgcgc > 2:446328/1‑149 (MQ=255) gTCGCAGTTCGGGGTGCAGGGCGGGCATGCGGGTGCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGa > 2:910247/1‑150 (MQ=255) gCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAg > 2:535156/1‑150 (MQ=255) cAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAgg < 1:690619/150‑1 (MQ=255) gTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGc < 2:254548/150‑1 (MQ=255) ttCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGcc < 1:535156/150‑1 (MQ=255) gggTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAg < 1:710300/142‑1 (MQ=255) gggTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAg > 2:710300/1‑142 (MQ=255) gTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGcaca < 2:1095953/150‑1 (MQ=255) tGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAg < 1:1052131/150‑1 (MQ=255) cAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGc > 2:319656/1‑150 (MQ=255) aGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCa > 2:1026841/1‑150 (MQ=255) gggcATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGa < 1:935505/150‑1 (MQ=255) ttCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAg < 1:680999/131‑1 (MQ=255) ttCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAg > 2:680999/1‑131 (MQ=255) ttCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAgg < 1:319656/150‑1 (MQ=255) gCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGGATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGgaga < 2:126495/150‑1 (MQ=255) gCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGgaga < 2:132979/150‑1 (MQ=255) aTAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCt < 2:947899/150‑1 (MQ=255) tAGCAGCTATGCGGTAAGCCATGGTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGCTTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTa < 1:899095/150‑1 (MQ=255) gcTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTg > 2:579860/1‑150 (MQ=255) gcTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTg < 1:255792/150‑1 (MQ=255) cTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGa < 1:788514/150‑1 (MQ=255) ggTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCg < 2:850049/150‑1 (MQ=255) gTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCg > 1:736774/1‑150 (MQ=255) ttATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGc < 1:1053817/150‑1 (MQ=255) gATNGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGccacc > 2:702979/1‑150 (MQ=255) gTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTg > 1:589562/1‑150 (MQ=255) tGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGa < 2:300789/150‑1 (MQ=255) gCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCGCAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGAc > 1:816602/1‑114 (MQ=255) gCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCGCAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGAc < 2:816602/114‑1 (MQ=255) ccTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATc < 1:1026841/150‑1 (MQ=255) tGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGa > 1:930950/1‑150 (MQ=255) gggCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGAtt < 1:910247/150‑1 (MQ=255) ggCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGCAGAATTCCGCCAGTACGGCCACCAACTGATCGACCTGCTTg > 1:396934/1‑150 (MQ=255) gCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGc > 1:766426/1‑150 (MQ=255) gCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGc < 2:914181/150‑1 (MQ=255) cATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGcc > 2:894692/1‑150 (MQ=255) gATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCAAAAGCAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGc > 1:357088/1‑150 (MQ=255) ccgatctcGGCTTCTTCGCGGCTGTAGGCGCGGGTTAACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGCGCTAGCGTGACCCCCGAACAATTCCGCCAGTTCGGCCACCAACTGATCGACCTGATTGCCGACTACCGc < 1:790526/143‑1 (MQ=255) gtgCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGa > 1:1027963/1‑150 (MQ=255) ggCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCCCAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACaa > 1:476092/1‑94 (MQ=255) ggCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACaa < 2:476092/94‑1 (MQ=255) ggCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATGCCGCCAGTACGGCCACCAACTGAGCGACCTGATTGCCGACTACCGCCAGATCgg > 2:790526/1‑149 (MQ=255) gCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGACCggg < 1:783893/150‑3 (MQ=255) cttcttCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGACCGTgg > 1:992703/1‑150 (MQ=255) ttcGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGACCGTGGGCGa > 2:251080/1‑150 (MQ=255) cgcgGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGACCGTGGGCGAAc < 2:930950/150‑1 (MQ=255) cgGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCGCCAACTGATCGACCTGATTGCCGACTACCGCCAGACCGTGGGCGAACGc > 2:574171/1‑150 (MQ=255) gCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGACCGTGGGCGAACGccc < 1:251080/150‑1 (MQ=255) gatctggCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCCCCTGATCGACCTGATTGCCGACTACCGCCAGACCGTGGGCGAACGCCCg < 1:256704/145‑1 (MQ=255) tGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGACCGTGGGCGAACGCCCgg > 1:595916/1‑150 (MQ=255) tttcgcgGGTAAACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGa < 2:623412/108‑1 (MQ=255) tttcgcgGGTAAACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATCCCGCCAGTACGGCCACCAACTGATCGACCTGa > 1:623412/4‑111 (MQ=39) ttcgcgGGTAAACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATc > 2:917178/3‑103 (MQ=255) ttcgcgGGTAAACCCGCGAAAGGGCAAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATc < 1:917178/101‑1 (MQ=255) ggCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCACCTGATCGACCTGATTGCCGACTCCCGCTAGACCGTGGGCGAACGCCCGGTCAt < 1:579860/150‑1 (MQ=255) gcgcGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCCGACCGTGGTCGAACGCCCggagatc > 2:256704/1‑145 (MQ=255) gcgcGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGACCGTGGGCGAACGCCCGGTCATg < 2:595916/150‑1 (MQ=255) cgGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGACCGTGGGCGAACGCCCGGTCATGGcc < 2:589562/150‑1 (MQ=255) gTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCaa < 2:1034260/90‑1 (MQ=255) gTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCaa < 1:114525/90‑1 (MQ=255) gTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCaa > 2:114525/1‑90 (MQ=255) gTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCaa > 1:1034260/1‑90 (MQ=255) gTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGACCGTGGGCGAACGCCCGGTCATGGCCCAg < 1:154517/150‑1 (MQ=255) | GCGCCAGTCGCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGGCATTGTGTTGATTGTGCGGCTTCTTCGCGGCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCAGCACAGGCAATGGATAACCCCCAGGAGAGCTAGCGTGACCCCCGAACAATTCCGCCAGTACGGCCACCAACTGATCGACCTGATTGCCGACTACCGCCAGACCGTGGGCGAACGCCCGGTCATGGCCCAG > NC_002947/2897621‑2897914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |