BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	2,598,565	(T)_7→6	intergenic (+144/‑140)	PP_2276 → / → PP_2277	exonuclease/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,598,559	0	T	.	100.0%	1013.6 / NA	207	intergenic (+138/‑146)	PP_2276/PP_2277	exonuclease/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (99/108); total (99/108)

Only 100 of 238 total aligned reads displayed.

TCTCCTGAATAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGGTTTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTAGGTGAGAGCGT  >  NC_002947/2598410‑2598704

tctcCTGAATAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGGt                                                                                                                                                   >  2:4048472/1‑150 (MQ=255)

  tcCTGAATAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGGCTTGGttt                                                                                                                                                 >  1:448138/1‑150 (MQ=255)

    cTGAATAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGGttttt                                                                                                                                               >  2:2366484/1‑150 (MQ=255)

      gAATAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGGttttttc                                                                                                                                             >  2:81822/1‑149 (MQ=255)

      gAATAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGGttttttc                                                                                                                                             >  1:3257065/1‑149 (MQ=255)

       aaTAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGGttttttcg                                                                                                                                            >  1:2274451/1‑148 (MQ=255)

        aTAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGGttttttcgg                                                                                                                                           <  2:3305610/150‑4 (MQ=255)

         tAAATTAGATAGAGAGGATTTATGAATTCTGAATCTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTGTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGAAGTTCGTCATCGTAAGTGTTTGGGGTCTTGGttttttcggg                                                                                                                                          <  1:3097094/150‑5 (MQ=255)

         tAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGGttttttcggg                                                                                                                                          <  1:1734461/150‑5 (MQ=255)

         tAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGGttttttcggg                                                                                                                                          >  2:2019039/1‑146 (MQ=255)

         tAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGGttttttcggg                                                                                                                                          <  2:1351710/150‑5 (MQ=255)

          aaaTTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCgggg                                                                                                                                        >  2:1664967/1‑150 (MQ=255)

                 aaaGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAAtgtt                                                                                                                                 <  1:359803/150‑1 (MQ=255)

                    gagagGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTa                                                                                                                              <  1:3826720/150‑1 (MQ=255)

                      gagGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTaat                                                                                                                            >  1:4270581/1‑149 (MQ=255)

                         gATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTa                                                                                                                         >  1:1592126/1‑150 (MQ=255)

                         gATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTa                                                                                                                         <  2:622642/150‑1 (MQ=255)

                          aTTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTAc                                                                                                                        <  1:4207848/150‑1 (MQ=255)

                            ttATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGt                                                                                                                      <  1:2130377/150‑1 (MQ=255)

                              aTGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTcc                                                                                                                    >  2:2234020/1‑150 (MQ=255)

                              aTGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTcc                                                                                                                    >  1:5052820/1‑150 (MQ=255)

                                gAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCtt                                                                                                                  >  2:1282840/1‑150 (MQ=255)

                                 aaTTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTc                                                                                                                 >  1:1883642/1‑150 (MQ=255)

                                 aaTTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTc                                                                                                                 >  1:628046/1‑150 (MQ=255)

                                 aaTTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTc                                                                                                                 <  2:1486853/150‑1 (MQ=255)

                                    tCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGtt                                                                                                              <  1:2587624/150‑1 (MQ=255)

                                    tCTGAAACGGTAGAGGCTGCCGTAACTCCCAACAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCTTTCAGCCGTTCGCCTTCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGACTGTTGTATAGTACGTCCTTCGtt                                                                                                              <  2:2276724/150‑1 (MQ=255)

                                      tGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGc                                                                                                            >  1:75064/1‑150 (MQ=255)

                                      tGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGACGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGc                                                                                                            >  2:152763/1‑150 (MQ=255)

                                       gAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGcc                                                                                                           <  2:4755132/150‑1 (MQ=255)

                                        aaaCTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCt                                                                                                          <  1:665591/150‑1 (MQ=255)

                                         aaCTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCtt                                                                                                         <  2:2612128/150‑1 (MQ=255)

                                         aaCTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCtt                                                                                                         <  1:1703666/150‑1 (MQ=255)

                                         aaCTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCtt                                                                                                         >  1:3049502/1‑150 (MQ=255)

                                         aaCTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCtt                                                                                                         >  1:2088417/1‑150 (MQ=255)

                                          aCTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTg                                                                                                        <  2:1141534/150‑1 (MQ=255)

                                           cTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGa                                                                                                       <  1:2297544/150‑1 (MQ=255)

                                           cTGTAGAGGCTGACGTAACTCCAAAAAGTGACTCTGTCCAGATTGGATGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGa                                                                                                       <  2:1856232/150‑1 (MQ=255)

                                            tGTAGAGGCTGCCGTAACTCCAAAAAGTGACACTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑AATTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGAt                                                                                                      <  1:4063668/150‑1 (MQ=255)

                                                       ccGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGaaa                                                                                           <  2:3409011/150‑1 (MQ=255)

                                                         gTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAgg                                                                                         >  2:2571034/1‑150 (MQ=255)

                                                           aaCTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGaa                                                                                       <  1:4371568/150‑1 (MQ=255)

                                                              tCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGACGGGAAGAt                                                                                    >  1:2800618/1‑150 (MQ=255)

                                                              tCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGAt                                                                                    <  2:3469621/150‑1 (MQ=255)

                                                               ccAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATc                                                                                   >  1:1933648/1‑150 (MQ=255)

                                                                 aaaaaGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCtt                                                                                 >  1:3278704/1‑150 (MQ=255)

                                                                 aaaaaGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCtt                                                                                 >  1:2009423/1‑150 (MQ=255)

                                                                  aaaaGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTa                                                                                <  1:2216493/150‑1 (MQ=255)

                                                                   aaaGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTAt                                                                               <  1:707945/150‑1 (MQ=255)

                                                                      gTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGaa                                                                            >  2:1724864/1‑150 (MQ=255)

                                                                        gACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAgg                                                                          <  1:4048472/150‑1 (MQ=255)

                                                                           tctGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTc                                                                       <  2:3164555/150‑1 (MQ=255)

                                                                             tGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCgg                                                                     <  1:3016340/150‑1 (MQ=255)

                                                                                ccAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCAc                                                                  >  2:2464817/1‑150 (MQ=255)

                                                                                 cAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACt                                                                 <  2:3800728/150‑1 (MQ=255)

                                                                                 cAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACt                                                                 >  2:4233907/1‑150 (MQ=255)

                                                                                 cAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACt                                                                 >  2:1960278/1‑150 (MQ=255)

                                                                                       ggAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTgg                                                           <  1:2873742/150‑1 (MQ=255)

                                                                                        gAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGa                                                          <  2:3816681/150‑1 (MQ=255)

                                                                                            ttCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGtt                                                      >  1:4543454/1‑150 (MQ=255)

                                                                                             tCGCACTATCTCAAGTCCATTCAGCCGTTCGATATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGttt                                                     <  1:4227942/150‑1 (MQ=255)

                                                                                              cGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATATTATGAAGGCTCGGCACTATCTGGATGTTTg                                                    >  2:2712202/1‑150 (MQ=255)

                                                                                               gCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGt                                                   <  1:1393146/150‑1 (MQ=255)

                                                                                               gCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGt                                                   <  1:2455936/150‑1 (MQ=255)

                                                                                                  cTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTAtt                                                <  1:1197938/150‑1 (MQ=255)

                                                                                                    aTCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTga                                              <  2:665465/150‑1 (MQ=255)

                                                                                                    aTCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTga                                              <  1:1621741/150‑1 (MQ=255)

                                                                                                    aTCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTga                                              <  2:3931034/150‑1 (MQ=255)

                                                                                                     tctcAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTgag                                             >  2:3102982/1‑150 (MQ=255)

                                                                                                      ctcAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTgaga                                            >  2:920073/1‑150 (MQ=255)

                                                                                                       tcAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGagag                                           >  2:4650599/1‑150 (MQ=255)

                                                                                                       tcAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGagag                                           >  2:2811157/1‑150 (MQ=255)

                                                                                                       tcAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGagag                                           >  2:4509866/1‑150 (MQ=255)

                                                                                                       tcAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGagag                                           >  2:4356002/1‑150 (MQ=255)

                                                                                                       tcAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGagag                                           >  2:3933235/1‑150 (MQ=255)

                                                                                                        cAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGc                                          >  1:1118290/1‑150 (MQ=255)

                                                                                                            tCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACg                                      >  1:392370/1‑150 (MQ=255)

                                                                                                              cATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGaa                                    <  1:3900982/150‑1 (MQ=255)

                                                                                                                ttCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGGTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAaga                                  <  2:1939290/150‑1 (MQ=255)

                                                                                                                  cAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGt                                <  2:4477534/150‑1 (MQ=255)

                                                                                                                    gCCGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTa                              >  1:856756/1‑150 (MQ=255)

                                                                                                                     ccGTTCGACATCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTAc                             >  1:3438615/1‑150 (MQ=255)

                                                                                                                              aTCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCaa                    >  1:4821259/1‑150 (MQ=255)

                                                                                                                               tCGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAAc                   <  2:3045912/150‑1 (MQ=255)

                                                                                                                                cGTAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACt                  <  2:2640679/150‑1 (MQ=255)

                                                                                                                                  tAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACttt                <  2:2144476/150‑1 (MQ=255)

                                                                                                                                  tAAGAGTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACttt                >  1:2997308/1‑150 (MQ=255)

                                                                                                                                    agagTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCt              <  2:1592126/150‑1 (MQ=255)

                                                                                                                                    agagTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCt              <  1:251230/150‑1 (MQ=255)

                                                                                                                                     gagTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTa             <  1:3544732/150‑1 (MQ=255)

                                                                                                                                     gagTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTa             <  2:3592795/150‑1 (MQ=255)

                                                                                                                                     gagTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTa             <  2:448138/150‑1 (MQ=255)

                                                                                                                                       gTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTAgg           <  1:81822/150‑1 (MQ=255)

                                                                                                                                       gTTTGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTAgg           <  1:1576949/150‑1 (MQ=255)

                                                                                                                                        tttGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTAGGt          <  2:3257065/150‑1 (MQ=255)

                                                                                                                                        tttGGGGTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTAGGt          <  1:2741247/150‑1 (MQ=255)

                                                                                                                                              gTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTAGGTGAGAGc    <  2:3475822/150‑1 (MQ=255)

                                                                                                                                              gTCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTAGGTGAGAGc    >  2:677453/1‑150 (MQ=255)

                                                                                                                                               tCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTAGGTGAGAGCg   >  1:3154802/1‑150 (MQ=255)

                                                                                                                                               tCTTGG‑TTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTAGGTGAGAGCg   >  2:2427894/1‑150 (MQ=255)

TCTCCTGAATAAATTACAAAGAGAGGATTTATGAATTCTGAAACTGTAGAGGCTGCCGTAACTCCAAAAAGTGACTCTGTCCAGATTGGAGGTTCGCACTATCTCAAGTCCATTCAGCCGTTCGACATCGTAAGAGTTTGGGGTCTTGGTTTTTTTCGGGGGAATGTTGTAAAGTACGTCCTTCGTTGCCTTGATAAAAATGGAAAGGAAGATCTTATGAAGGCTCGGCACTATCTGGATGTTTGTATTGAGAGCTACGAAGAGTTACGGGAATCAACTTTCTAGGTGAGAGCGT  >  NC_002947/2598410‑2598704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`