Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_002947 5,610,741 (CTG)3→5 coding (105/333 nt) emrE → small multidrug resistance protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 56107321 (0.000)216 (0.970)
+CTGCTG
136/264 0.0 99.5% coding (96/333 nt) emrE small multidrug resistance protein
?NC_002947 5610733 = 1 (0.000)coding (97/333 nt) emrE small multidrug resistance protein

Only 100 of 245 total aligned reads displayed.

CCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5610587‑5610732
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATGGGCAGAA  >  NC_002947/5610733‑5610881
                                                                                                                                                  ||||||                                                                                                                                                     
CCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGC                                                                                                                                                         >  2:4643278/1‑150
CCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGC                                                                                                                                                         >  2:303130/1‑150
CCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGC                                                                                                                                                         >  1:627058/1‑150
      CAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGC                                                                                                                                                   <  2:4638027/150‑1
              GTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATG                                                                                                                                           >  2:1175448/1‑150
                CTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGT                                                                                                                                         >  2:2530249/1‑150
                 TAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTG                                                                                                                                        >  2:669425/1‑150
                 TAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTG                                                                                                                                        >  2:128587/1‑150
                  AGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGG                                                                                                                                       <  2:916310/150‑1
                  AGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGG                                                                                                                                       >  2:2770991/1‑150
                       GCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGC                                                                                                                                  <  2:268961/150‑1
                        CCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCT                                                                                                                                 <  2:3551825/150‑1
                         CCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTA                                                                                                                                >  2:3407765/1‑150
                          CGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTAT                                                                                                                               <  2:2175653/150‑1
                           GCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATG                                                                                                                              >  1:1111525/1‑150
                            CTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGG                                                                                                                             <  1:1800020/150‑1
                                GTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATT                                                                                                                         <  1:4603318/150‑1
                                    CGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGT                                                                                                                     >  2:283708/1‑150
                                    CGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGT                                                                                                                     <  1:4839343/150‑1
                                        GGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTG                                                                                                                 <  1:1573017/150‑1
                                        GGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTG                                                                                                                 <  1:7566/150‑1
                                           TCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGAT                                                                                                              <  2:2051861/150‑1
                                             CTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGC                                                                                                            >  2:264304/1‑150
                                             CTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGC                                                                                                            <  2:2460477/150‑1
                                              TGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCT                                                                                                           >  1:1070135/1‑150
                                              TGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCT                                                                                                           >  2:1346711/1‑150
                                              TGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCT                                                                                                           >  1:3742388/1‑150
                                               GCCATGAATGCCTATACCTACATCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTG                                                                                                          >  1:1303708/1‑150
                                                CCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGA                                                                                                         >  1:2127300/1‑150
                                                 CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGAC                                                                                                        >  2:1835573/1‑150
                                                  ATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACG                                                                                                       >  1:2449615/1‑150
                                                   TGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGC                                                                                                      >  2:791410/1‑150
                                                     AATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTG                                                                                                    <  2:4204047/150‑1
                                                      ATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGG                                                                                                   <  1:367883/150‑1
                                                      ATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGG                                                                                                   <  2:1320869/150‑1
                                                      ATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGG                                                                                                   <  1:4640559/150‑1
                                                          CTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGT                                                                                               >  1:3499431/1‑150
                                                           TATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTC                                                                                              >  2:3167631/1‑150
                                                           TATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTC                                                                                                                   <  1:1435827/129‑1
                                                             TACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGTCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCG                                                                                            >  2:385099/1‑150
                                                               CCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCA                                                                                          <  2:2590602/150‑1
                                                                 TACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGC                                                                                        >  2:1797408/1‑150
                                                                    CTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATT                                                                                     <  1:2462527/150‑1
                                                                     TCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTC                                                                                    >  2:5022631/1‑150
                                                                         CATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGGTGCTGACGCTGGTGGTCCGCAGCATTCCGGT                                                                                >  1:1966078/1‑150
                                                                         CATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGT                                                                                >  2:1459679/1‑150
                                                                         CATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGT                                                                                <  1:371943/150‑1
                                                                         CATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGT                                                                                >  1:3865652/1‑150
                                                                           TTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGG                                                                              >  2:216035/1‑150
                                                                            TGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGG                                                                             <  2:346201/150‑1
                                                                                ATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATT                                                                         <  1:134265/150‑1
                                                                                 TCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTG                                                                        >  2:3284284/1‑150
                                                                                         GAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGA                                                                                                         >  2:4569003/1‑109
                                                                                         GAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGA                                                                                                         <  1:4569003/109‑1
                                                                                           AGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCAT                                                              >  1:3957352/1‑150
                                                                                            GTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATC                                                             >  2:1776576/1‑150
                                                                                            GTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATC                                                             <  1:2671270/150‑1
                                                                                             TCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCT                                                            <  1:4643278/150‑1
                                                                                             TCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCT                                                            >  1:4372053/1‑150
                                                                                                TCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGT                                                         >  1:2237968/1‑150
                                                                                                   CCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGG                                                      <  2:2419542/150‑1
                                                                                                   CCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGG                                                      >  1:2410154/1‑150
                                                                                                     ACCGCCTTCATCGAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGG                                                    >  1:1618123/1‑150
                                                                                                        GCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTG                                                 <  1:140947/150‑1
                                                                                                        GCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTG                                                 <  1:919149/150‑1
                                                                                                           TCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGG                                              >  2:2294602/1‑150
                                                                                                           TCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGG                                              >  2:2212726/1‑150
                                                                                                           TCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGAC                                                                                                        <  1:1200547/92‑1
                                                                                                           TCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGAC                                                                                                        >  2:1200547/1‑92
                                                                                                             GATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGAT                                            >  2:3998024/1‑150
                                                                                                              ATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGAGATTGCCTACGCCATCTGGTCGGGGCTGGGGATT                                           >  1:4113282/1‑150
                                                                                                               TGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTG                                          >  1:319444/1‑150
                                                                                                                GAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGT                                         >  2:392706/1‑150
                                                                                                                  AGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGC                                       >  1:4017126/1‑150
                                                                                                                  AGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGC                                       >  2:709394/1‑150
                                                                                                                    GCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGC                                                                                        >  1:69613/1‑99
                                                                                                                        TGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCA                                 <  2:319444/150‑1
                                                                                                                        TGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCA                                 <  1:303130/150‑1
                                                                                                                          AAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGT                               <  1:3319060/150‑1
                                                                                                                          AAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCA                                                                                          >  1:2308549/1‑91
                                                                                                                             GGCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTG                            >  2:844093/1‑150
                                                                                                                              GCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGG                           >  1:2068183/1‑150
                                                                                                                              GCCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGG                           >  2:4746016/1‑150
                                                                                                                               CCTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATCGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGC                          <  1:3422335/150‑1
                                                                                                                                CTGAGCACGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCG                         <  1:4404356/150‑1
                                                                                                                                       CGCCGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCAGTCCGGTGGGGAGTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCGGG                  <  2:4781654/150‑1
                                                                                                                                          CGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGA               <  2:1587110/150‑1
                                                                                                                                          CGTTGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGA               >  2:4113218/1‑150
                                                                                                                                             TGCCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCT            <  1:1534830/150‑1
                                                                                                                                               CCACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTAT          <  1:2780350/150‑1
                                                                                                                                                CACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATG         <  1:4975540/150‑1
                                                                                                                                                CACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATG         <  2:2789830/150‑1
                                                                                                                                                CACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATG         <  2:3516183/150‑1
                                                                                                                                                 ACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATGG        >  2:4246762/1‑150
                                                                                                                                                 ACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATGG        >  2:4903665/1‑150
                                                                                                                                                 ACTGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATGG        >  2:2312164/1‑150
                                                                                                                                                   TGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATGGGC      >  1:948951/1‑150
                                                                                                                                                   TGCTGCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATGGGC      <  2:88054/150‑1
                                                                                                                                                      TGCTGCTGCGGTTGGTGGTTGGCTATGGCTTGGCGTTCTGGATGCGGACGCTGGTGGTCCGCAGGATTCCGGTGGGGAGTGCCTACGCCATCTGGTCGGGGCTGGGGTTTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATGGGCAGA   <  2:3866632/150‑1
                                                                                                                                                       GCTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATGGGCAGAA  <  1:174350/150‑1
                                                                                                                                                  ||||||                                                                                                                                                     
CCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5610587‑5610732
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGCTGATCAGTGTGGCGGCGCTGGTGATCTATGGGCAGAA  >  NC_002947/5610733‑5610881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.