| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5201663 | 17 (0.340) | 14 (0.390) | 9/192 | 2.9 | 51.6% | intergenic (‑101/‑79) | PP_4582/PP_4583 | membrane protein/putative Peptidase |
| ? | NC_002947 | = 5201684 | 14 (0.390) | intergenic (‑122/‑58) | PP_4582/PP_4583 | membrane protein/putative Peptidase | |||||
GGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACA > NC_002947/5201515‑5201812 | ggcTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACCCTTCTCCGGGCGCAGACAGTGTTTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCt < 2:308185/150‑1 (MQ=255) aaGCCCCAGGCGAAGGTTTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGag > 2:639721/1‑149 (MQ=255) cccAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCt < 1:994735/150‑1 (MQ=255) cccAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCt > 1:1083813/1‑150 (MQ=255) ccAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgagg > 2:1068828‑M1/1‑131 (MQ=255) aGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcg < 2:579512‑M1/150‑28 (MQ=255) ggTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgg < 1:759344‑M1/150‑29 (MQ=255) ggTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgg < 2:525130‑M1/150‑29 (MQ=255) ggTGTACTCGTTCTCTTTCATGGTTTTCGTGCAAGCCAGGCAAATAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgg > 2:389591‑M2/1‑143 (MQ=255) gtgtAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcggg < 1:1069141‑M1/150‑30 (MQ=255) gtgtAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTNCGCGGGNAAACCCGCTCCancagggatcgcaccgaggtaggagcggg < 1:1068828‑M1/150‑30 (MQ=255) gTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttac > 2:949357‑M2/1‑137 (MQ=255) tctcGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAGACCCGCTCCaacagggatcgcaccgaggtaggagcggg > 2:842532‑M1/1‑111 (MQ=255) tctcGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcggg < 1:842532‑M1/140‑30 (MQ=255) tcGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaa > 2:1083813‑M2/1‑130 (MQ=255) ggTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaaga > 2:1006896‑M2/1‑128 (MQ=255) tGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcg < 2:284169‑M1/120‑28 (MQ=255) tGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcg > 1:284169‑M1/1‑93 (MQ=255) aGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggt > 1:310822‑M1/1‑85 (MQ=255) aGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggt < 2:310822‑M1/115‑31 (MQ=255) ccTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggt > 1:292395‑M1/1‑72 (MQ=255) ccTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggt < 2:292395‑M1/102‑31 (MQ=255) aaaCACTTTTCCGGGCGCAGACAGTGCTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccg < 2:1061593‑M2/112‑28 (MQ=255) aaaCACTTTTCCGGGCGCAGACAGTGCTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccg > 1:1061593‑M2/1‑85 (MQ=255) aaCACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTg > 1:656620/1‑82 (MQ=255) aaCACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTg < 2:656620/82‑1 (MQ=255) acTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcggg > 2:562356‑M2/1‑81 (MQ=255) acTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcggg < 1:562356‑M2/89‑9 (MQ=255) ccTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaaga > 1:24284‑M2/1‑55 (MQ=255) ccTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaaga < 2:24284‑M2/77‑23 (MQ=255) gtgCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGAt < 2:1012667/45‑1 (MQ=255) gtgCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGAt > 1:1012667/1‑45 (MQ=255) gtgCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaa < 1:616422‑M2/72‑21 (MQ=255) gtgCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaa > 2:616422‑M2/1‑52 (MQ=255) cGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaagcactgtctgcgcccggaaaagtgttt > 1:1061593‑M1/1‑27 (MQ=255) cGGCCTCTTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaagcactgtctgcgcccggaaaagtgttt < 2:1061593‑M1/112‑86 (MQ=255) tctTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgacc > 2:1006896‑M1/1‑22 (MQ=255) tctTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacagg < 2:24284‑M1/77‑56 (MQ=255) tctTCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacagg > 1:24284‑M1/1‑22 (MQ=255) ttCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccga > 2:1083813‑M1/1‑20 (MQ=255) ttCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcac > 2:616422‑M1/1‑20 (MQ=255) ttCGCGGGTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcac < 1:616422‑M1/72‑53 (MQ=255) cgcgGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCg > 2:26924/1‑150 (MQ=255) ggTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATg > 2:821007/1‑150 (MQ=255) gTAAACCCGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgagaacgac > 2:949357‑M1/1‑13 (MQ=255) gTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGc > 2:826752/1‑150 (MQ=255) gTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCAAGAGTGCCCAAGCCGACCAGGCCACCGACCCGTATGc > 2:417511/1‑150 (MQ=255) aCCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcct < 2:310822‑M2/115‑86 (MQ=255) aCCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcct > 1:310822‑M2/1‑30 (MQ=255) aCCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcatagg < 2:292395‑M2/102‑73 (MQ=255) aCCCGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcatagg > 1:292395‑M2/1‑30 (MQ=255) aCCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAACAATCCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCGACCGACACTTATGCCTgg > 1:396603/1‑150 (MQ=38) cccGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagt < 1:562356‑M1/89‑82 (MQ=255) cccGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagt > 2:562356‑M1/1‑8 (MQ=255) cccGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgagaacgactacac < 1:1069141‑M2/150‑122 (MQ=255) cccGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgaga < 1:842532‑M2/140‑112 (MQ=255) cccGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtctacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgaga > 2:842532‑M2/1‑29 (MQ=255) cccGCTCCTACCTCGGTGCGATCCCTGNTggagcgggtttncccgcgnagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgagaacgactacac < 1:1068828‑M2/150‑122 (MQ=255) cggCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGCCCAGGCCACCGACCCGTATGCCTGGCt > 2:280362/3‑150 (MQ=255) ccGCTCCaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctatttgcctggcttgcacgaaaaccatgaaagagaacgagtacacc > 2:389591‑M1/1‑7 (MQ=255) ccGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgagaacgactacacc < 2:525130‑M2/150‑123 (MQ=255) ccGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgagaacgactacacc < 1:759344‑M2/150‑123 (MQ=255) cGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgcacgaacaccatgaccgagaacgactacacct < 2:579512‑M2/150‑124 (MQ=255) cGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgca > 1:284169‑M2/1‑27 (MQ=255) cGCTCCTACCTCGGTGCGATCCCTGTTggagcgggtttacccgcgaagaggccggcacaggcaaacactgtctgcgcccggaaaagtgtttatcataggcatctctttgcctggcttgca < 2:284169‑M2/120‑94 (MQ=255) gCTCCTACCTCGGTGCGCTCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGcccc < 1:651575/99‑1 (MQ=255) gCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGcccc > 2:651575/1‑99 (MQ=255) cTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACa > 2:1233992/1‑150 (MQ=255) | GGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACA > NC_002947/5201515‑5201812 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |