Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 5,610,676 G→A E14K (GAA→AAA)  emrE → small multidrug resistance protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,610,6760GA100.0% 1131.3 / NA 311E14K (GAA→AAA) emrEsmall multidrug resistance protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (170/141);  total (170/141)

Only 100 of 313 total aligned reads displayed.

CAAGGTTCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATC  >  NC_002947/5610529‑5610822
                                                                                                                                                   |                                                                                                                                                  
 aaGGTTCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAg                                                                                                                                                 >  1:2511955/1‑150 (MQ=255)
    gTTCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCa                                                                                                                                              >  2:6303220/1‑150 (MQ=255)
    gTTCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCa                                                                                                                                              >  1:6496759/1‑150 (MQ=255)
     ttCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCAt                                                                                                                                             <  2:3034184/150‑1 (MQ=255)
      tCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATc                                                                                                                                            >  2:1149287/1‑150 (MQ=255)
      tCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATc                                                                                                                                            <  2:5025371/150‑1 (MQ=255)
      tCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATc                                                                                                                                            <  2:4850998/150‑1 (MQ=255)
      tCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATc                                                                                                                                            <  1:624086/150‑1 (MQ=255)
      tCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATc                                                                                                                                            <  2:3782636/150‑1 (MQ=255)
      tCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCAATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATc                                                                                                                                            <  1:5733171/150‑1 (MQ=255)
         aCTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGcc                                                                                                                                         >  1:5428288/1‑150 (MQ=255)
            gCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCAcc                                                                                                                                      >  1:85565/1‑150 (MQ=255)
            gCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCAcc                                                                                                                                      >  1:3141056/1‑150 (MQ=255)
              tCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGc                                                                                                                                    >  2:2198626/1‑150 (MQ=255)
                  ccATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACCTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCg                                                                                                                                >  2:1845412/1‑150 (MQ=255)
                   cATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGa                                                                                                                               <  1:533280/150‑1 (MQ=255)
                    aTCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTATCGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCTCCGCCTCGAt                                                                                                                              <  2:5323924/150‑1 (MQ=255)
                    aTCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGAt                                                                                                                              >  1:5111999/1‑150 (MQ=255)
                     tCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATg                                                                                                                             >  2:3818525/1‑150 (MQ=255)
                     tCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATg                                                                                                                             >  2:2708454/1‑150 (MQ=255)
                            aTCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCgg                                                                                                                      <  2:5825815/150‑1 (MQ=255)
                               tcCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTTCATCGAGGCGGTgg                                                                                                                   <  1:1038051/150‑2 (MQ=255)
                                 ccATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGaaa                                                                                                                 <  1:3597586/150‑1 (MQ=255)
                                    tatCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGc                                                                                                              <  1:2725857/150‑1 (MQ=255)
                                      tCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCt                                                                                                            <  2:4460594/150‑1 (MQ=255)
                                       cGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTg                                                                                                           <  1:1695827/150‑1 (MQ=255)
                                        gagaGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGa                                                                                                          <  2:2873034/147‑1 (MQ=255)
                                        gATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGa                                                                                                          >  2:2043204/1‑150 (MQ=255)
                                        gATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGa                                                                                                          <  2:2960013/150‑1 (MQ=255)
                                          tAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGc                                                                                                        >  1:4570379/1‑150 (MQ=255)
                                             gTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAgagcc                                                                                                     >  1:6620328/1‑146 (MQ=255)
                                             gTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACg                                                                                                     >  1:1541827/1‑150 (MQ=255)
                                             gTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTAACTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACg                                                                                                     >  2:347960/1‑150 (MQ=255)
                                                aTGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCg                                                                                                  >  1:4724880/1‑150 (MQ=255)
                                                     tttACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGcc                                                                                             >  2:834264/1‑150 (MQ=255)
                                                      ttACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCa                                                                                            >  2:5475469/1‑150 (MQ=255)
                                                       tACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCAc                                                                                           >  2:4692355/1‑150 (MQ=255)
                                                          cccATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAg                                                                                                                          >  2:5229548/1‑116 (MQ=255)
                                                          cccATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCActgc                                                                                        >  2:5972611/1‑150 (MQ=255)
                                                          cccATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCActgc                                                                                        >  1:287535/1‑150 (MQ=255)
                                                           ccATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCActgct                                                                                       <  2:2009216/150‑1 (MQ=255)
                                                           ccATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCActgct                                                                                       >  2:2320473/1‑150 (MQ=255)
                                                           ccATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCActgct                                                                                       >  2:3909836/1‑150 (MQ=255)
                                                             aTCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCActgctgc                                                                                     >  2:1036682/1‑150 (MQ=255)
                                                                 aGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGAt                                                                                 >  1:5190965/1‑150 (MQ=255)
                                                                     aaCGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGAtggtg                                                                             >  1:5883003/1‑150 (MQ=255)
                                                                             gAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTa                                                                     >  1:5960498/1‑150 (MQ=255)
                                                                              aaTGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTAt                                                                    <  1:2950970/150‑1 (MQ=255)
                                                                              aaTGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTAt                                                                    <  2:6877681/150‑1 (MQ=255)
                                                                              aaTGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTAt                                                                    <  2:5162985/150‑1 (MQ=255)
                                                                                     gCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTg                                                             <  1:3863536/150‑1 (MQ=255)
                                                                                      cTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGc                                                            <  1:1182456/150‑1 (MQ=255)
                                                                                      cTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGc                                                            <  1:6719282/150‑1 (MQ=255)
                                                                                          gTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCCTTGCGtgc                                                        >  2:3458027/1‑148 (MQ=255)
                                                                                          gTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTc                                                        >  2:2442837/1‑150 (MQ=255)
                                                                                          gTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTc                                                        >  1:2632380/1‑150 (MQ=255)
                                                                                           tAACGGAGGATCCTGCCATGACTGCCTATCCCTACCTCGCCATTGCCATCTGCGCCACAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCt                                                       <  2:6202946/150‑1 (MQ=255)
                                                                                            aaCGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTg                                                      <  1:2437169/150‑1 (MQ=255)
                                                                                            aaCGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTg                                                      <  2:3205343/150‑1 (MQ=255)
                                                                                                gaggaTCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTg                                                                         <  1:3806724/127‑1 (MQ=255)
                                                                                                gaggaTCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTg                                                                         <  2:762461/127‑1 (MQ=255)
                                                                                                gaggaTCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATg                                                  >  1:1479165/1‑150 (MQ=255)
                                                                                                gaggaTCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATg                                                  >  1:4962038/1‑150 (MQ=255)
                                                                                                    aTCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGa                                              <  1:6334144/150‑1 (MQ=255)
                                                                                                       cTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGc                                           >  1:1895190/1‑150 (MQ=255)
                                                                                                       cTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGc                                           >  2:4788441/1‑150 (MQ=255)
                                                                                                        tGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCt                                          >  2:3705654/1‑150 (MQ=255)
                                                                                                        tGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCt                                          >  1:5451123/1‑150 (MQ=255)
                                                                                                        tGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCt                                          >  2:2589665/1‑150 (MQ=255)
                                                                                                         gCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCtg                                         <  1:6519327/150‑1 (MQ=255)
                                                                                                          ccATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCtgg                                        >  2:4141975/1‑150 (MQ=255)
                                                                                                            aTGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCtggtg                                      >  1:6878939/1‑150 (MQ=255)
                                                                                                              gAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTggtggt                                    >  2:574405/1‑150 (MQ=255)
                                                                                                              gAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTggtggt                                    <  1:1831467/150‑1 (MQ=255)
                                                                                                              gAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTggtggt                                    >  1:4533572/1‑150 (MQ=255)
                                                                                                              gAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTggtggt                                    >  1:6122440/1‑150 (MQ=255)
                                                                                                               aaTGCCTATCCCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCTTTGCGTTCTGGATGCTGACGCTGGTGGTc                                   <  2:6685946/150‑1 (MQ=255)
                                                                                                               aaTGCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTc                                   >  1:4208739/1‑150 (MQ=255)
                                                                                                                  gCCTATACCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCgc                                <  1:942159/150‑1 (MQ=255)
                                                                                                                     tataCCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGc                                                                                              >  1:331234/1‑85 (MQ=255)
                                                                                                                      ataCCTACCTCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCgcagca                            >  1:435348/1‑150 (MQ=255)
                                                                                                                         cctacctCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTc                         >  2:4955012/1‑150 (MQ=255)
                                                                                                                          ctacctCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTcc                        >  1:4732820/1‑150 (MQ=255)
                                                                                                                              ctCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTg                    <  1:3244731/150‑1 (MQ=255)
                                                                                                                              ctCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTg                    >  2:4612956/1‑150 (MQ=255)
                                                                                                                              ctCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTg                    >  2:2474237/1‑150 (MQ=255)
                                                                                                                              ctCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTg                    <  1:4185241/150‑1 (MQ=255)
                                                                                                                              ctCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTg                    <  1:834264/150‑1 (MQ=255)
                                                                                                                               tCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTgg                   >  2:4287504/1‑150 (MQ=255)
                                                                                                                               tCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTgg                   >  2:1963201/1‑150 (MQ=255)
                                                                                                                               tCGCCATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTgg                   >  1:4809664/1‑150 (MQ=255)
                                                                                                                                   cATTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGAt               >  2:6138761/1‑150 (MQ=255)
                                                                                                                                    aTTGCCATCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGAtt              <  1:5682613/150‑1 (MQ=255)
                                                                                                                                           tCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACg       >  1:3472246/1‑150 (MQ=255)
                                                                                                                                           tCTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACg       >  2:2739603/1‑150 (MQ=255)
                                                                                                                                            cTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGc      >  1:2046803/1‑150 (MQ=255)
                                                                                                                                            cTGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGc      <  1:718472/150‑1 (MQ=255)
                                                                                                                                             tGCGCCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGcc     >  2:3268594/1‑150 (MQ=255)
                                                                                                                                                gcCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATc  >  1:2337675/1‑150 (MQ=255)
                                                                                                                                                gcCAAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATc  >  2:5650488/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CAAGGTTCCACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATC  >  NC_002947/5610529‑5610822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑