| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,865,939 | Δ1 bp | 9.8% | coding (983/1020 nt) | PP_3415 ← | LacI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,865,939 | 0 | T | . | 9.8% | 174.5 / 14.3 | 61 | coding (983/1020 nt) | PP_3415 | LacI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (32/23); new base . (3/3); total (35/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.79e-01 | |||||||||||
CATGCCCCGCGTCGCCTGCTTCGCAGGAAAACCCGCTGCACCTTCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCGTTGAAACCGAC > NC_002947/3865802‑3866084 | cATGCCCCGCGTCGCCTGCTTCGCAGGAAAACCCGCTGCACCTTCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGATAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCAt > 1:1405795/1‑150 (MQ=255) ccTGCTTCGCAGGAAAACCCGCTGCACCTTCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTc > 1:1176369/1‑150 (MQ=255) cGCAGGAAAACCCGCTGCACCTTCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCa > 1:762182/1‑150 (MQ=255) cAGGAAAACCCGCTGCACCTTCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCtt < 1:1190904/140‑1 (MQ=255) cAGGAAAACCCGCTGCACCTTCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCtt > 2:1190904/1‑140 (MQ=255) gCTGCACCTTCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCCCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCtt > 2:756874/1‑129 (MQ=255) gCTGCACCTTCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCCCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCtt < 1:756874/129‑1 (MQ=255) cTGCACCTTCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGA‑CCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAgcg < 2:210676/150‑1 (MQ=255) cACCTTCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGc‑‑‑‑‑c > 2:106988/1‑150 (MQ=255) ttCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑Ctgtg > 1:720178/1‑150 (MQ=255) cGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGcgcc > 2:478551/1‑150 (MQ=255) gCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGA‑CCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGcgccccgc > 1:623567/1‑150 (MQ=255) ccAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGcgccccgc > 2:878581/1‑150 (MQ=255) aaTCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGcgccccgccc > 1:929954/1‑150 (MQ=255) aTCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCCTCAGCTCAAAGCCCAGATCCTCCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAACAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCgccccgcccc > 1:192683/1‑150 (MQ=255) tCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCca > 1:70647/1‑123 (MQ=255) tCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCca < 2:70647/123‑1 (MQ=255) tCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAACAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCa > 1:637691/1‑150 (MQ=255) tCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGc > 1:225965/1‑150 (MQ=255) cTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCctgc < 2:94747/80‑1 (MQ=255) cTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCctgc > 1:94747/1‑80 (MQ=255) tgtgGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGc > 1:1091672/1‑150 (MQ=255) gAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAggaggtc < 2:225965/150‑7 (MQ=255) gcgcgAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCAccc > 1:343345/1‑85 (MQ=255) gcgcgAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCAccc < 2:343345/85‑1 (MQ=255) gcgAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGAt > 2:941834/1‑62 (MQ=255) gcgAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGAt < 1:941834/62‑1 (MQ=255) gagaAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGaa < 2:71219/150‑1 (MQ=255) aGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGAACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGa < 2:1366968/150‑1 (MQ=255) ggCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAg < 1:106988/150‑1 (MQ=255) gCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGcc < 1:171869/110‑1 (MQ=255) gCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGcc > 2:171869/1‑110 (MQ=255) ccTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCcgc < 1:238076/111‑1 (MQ=255) ccTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCcgc > 2:238076/1‑111 (MQ=255) cTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCATCCAGCAACGCCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGa > 1:1140522/1‑150 (MQ=255) ttGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCa > 1:131466/1‑150 (MQ=255) gccggCATTCTCAGCCGCGCTCGCGCACCATCAGCTCAAAGTCACACTACTGAGAAGCACGTGACTGGCGTTTCCCAC‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCCCCGCAGCCCGCTGTGTGCGAATGGAGGTCAGcc < 1:878581/147‑1 (MQ=255) tcAGGTGCTCTCGCGCACAATCAGCTGACAGAAAAGATGATGCTGCGCATTTGTCACCGGGTTTCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGCCTGTGCTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGc > 2:1231707/1‑150 (MQ=255) gTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATgc < 2:720178/150‑1 (MQ=255) gCTCTCGCGCTCCTTCAGCGCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATgcgc > 2:1308283/1‑150 (MQ=255) gCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCATCCAGCAACGCCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCAc < 2:1140522/150‑1 (MQ=255) ctcGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGa > 1:818417/1‑150 (MQ=255) cACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCgg < 2:1405795/150‑1 (MQ=255) cACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAACAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCgg < 2:637691/150‑1 (MQ=255) aCCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCggg > 2:743438/1‑150 (MQ=255) cctCAGCTCAAAGCCCGGATCCTGCGGCGCATTCGGCACGCGCTTTCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCAGCGACCCGACCCACCACACCACTGAAGACGCGATACAATGGCAGCTGGTGCACCATATGCGCCGAGGCCGGgag > 2:312364/3‑150 (MQ=255) tCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGAt > 2:480032/1‑150 (MQ=255) tCAGCTCAAAGCCCAGA‑CCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCgg > 2:789230/1‑144 (MQ=255) tCAGCTCAAAGCCCAGA‑CCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCgg < 1:789230/144‑1 (MQ=255) ccAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGACTGGACGACAGCCGTGGCACCATATGCGCCGAGGCCGGGAGAt < 1:743438/149‑1 (MQ=255) cTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCCGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCGtt < 1:178402/150‑1 (MQ=255) cTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCCCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCTCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCGtt < 2:192683/150‑1 (MQ=255) tCAAAGCCCAGA‑CCTGCTGCGCATTCGTCACCCGCTTCTCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCg > 2:484513/1‑146 (MQ=255) tCAAAGCCCAGA‑CCTGCTGCGCATTCGTCACCCGCTTCTCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCg < 1:484513/146‑1 (MQ=255) cAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCGTTGa > 1:966583/1‑150 (MQ=255) aaaGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGCCTGTGCTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCg > 1:742737/1‑150 (MQ=255) aaGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCGTTGaaa < 1:478551/150‑1 (MQ=255) gCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCGtt > 2:22870/1‑144 (MQ=255) gCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCGtt < 1:22870/144‑1 (MQ=255) cccAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGc < 2:196372/83‑1 (MQ=255) cccAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGc > 1:196372/1‑83 (MQ=255) ccAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCGTTGAAACCGa < 2:1091672/150‑1 (MQ=255) cAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCGTTGAAACCGAc > 1:1004971/1‑150 (MQ=255) | CATGCCCCGCGTCGCCTGCTTCGCAGGAAAACCCGCTGCACCTTCGTTTCGGGCCAATCATTCCTGTGGGAGTCGCGCGAGAAGGCCTTGGCGGGCACTCTCAGGTGCTCTCGCGCACCATCAGCTCAAAGCCCAGATCCTGCTGCGCATTCGTCACCCGCTTCCCAT‑‑‑‑‑‑‑‑‑CCAGCAACGCCAGCAGCGC‑‑‑‑‑CTGTGCCGCGCCCCGCCCCACCGCAGCCCGCGGTGTGCGAATGGAGGTCAGCCGTGGCACCATATGCGCCGAGGCCGGGAGATCGTTGAAACCGAC > NC_002947/3865802‑3866084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |