| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,196,274 | Δ1 bp | 7.7% | coding (329/1755 nt) | xcpQ → | type II secretion pathway protein XcpQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,196,274 | 0 | C | . | 7.7% | 199.2 / 11.2 | 65 | coding (329/1755 nt) | xcpQ | type II secretion pathway protein XcpQ |
| Reads supporting (aligned to +/- strand): ref base C (28/32); new base . (3/2); total (31/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.74e-01 | |||||||||||
CCCCCGGGTCAAGGGCAAGGTCACCGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGG > NC_002947/1196125‑1196423 | cccccGGGTCAAGGGCAAGGTCACCGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGc > 2:1129588/1‑150 (MQ=255) cccGGGTCAAGGGCAAGGTCACCGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCc‑g > 2:777373/1‑150 (MQ=255) gcGGGTCAAGGGCAAGGTCACCGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAACATCGTGCCCAACCAGGCc‑gc > 2:1079052/2‑150 (MQ=255) ccGGGTCAAGGGCAAGGTCACCGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGcgcg > 1:255580/1‑147 (MQ=255) aaGGGCAAGGTCACCGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTg > 1:1185280/1‑150 (MQ=255) ggCAAGGTCACCGTGCGCACCGTCGACCTGCACGACGAAGATATACTTCTATTGGTAAGTGAT‑GCTCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGG‑C‑GCGCGGCCTggtc < 1:1236336/150‑3 (MQ=255) cAAGGTCACCGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGG‑C‑GCGCGGCCTggtcgg < 2:255580/150‑5 (MQ=255) tCACCGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGc < 1:1318804/150‑1 (MQ=255) aCCGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCa > 2:1313395/1‑150 (MQ=255) aCCGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCa < 1:777373/150‑1 (MQ=255) cGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGGAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAgccggtgccggt > 2:477059/1‑150 (MQ=255) gcgcACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGa < 1:999277/150‑1 (MQ=255) tgcACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAg < 1:417444/149‑1 (MQ=255) tCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAggcgggcg < 2:745441/150‑1 (MQ=255) gACCTGCACAACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGcgggcggg < 1:1129588/150‑1 (MQ=255) aCCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGTCAGTGGAGGCgggcgggc > 2:657285/1‑150 (MQ=255) aCCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGAGGTCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCgggcgggc > 1:969171/1‑150 (MQ=255) ccTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGgca > 1:926747/1‑150 (MQ=255) gCACGACGCCGA‑CGCAATCTACTACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGgcagca < 2:969171/150‑1 (MQ=255) gccATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGc < 2:767760/150‑1 (MQ=255) aTCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGAc > 2:1283223/1‑150 (MQ=255) tCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAAGCGGACGGGCAGCTGGGCGAGGGCAGCGACa > 2:330940/1‑150 (MQ=255) cGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCgg > 2:806416/1‑149 (MQ=255) cGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGt > 2:344217/1‑150 (MQ=255) cGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGt < 1:1099558/150‑1 (MQ=255) gACATCTTCCTGGCCCACCTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGGGGGCAGCAGGGCGAGGGCAGCGACAGCGTg < 1:428290/150‑1 (MQ=255) gACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGTCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTg < 1:657285/150‑1 (MQ=255) gACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTg < 1:133235/150‑1 (MQ=255) gACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTg < 1:594980/150‑1 (MQ=255) gACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTg > 1:763127/1‑150 (MQ=255) cATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGc < 1:437722/150‑1 (MQ=255) tCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCa > 2:242436/1‑150 (MQ=255) tGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCcgcg > 2:828566/1‑150 (MQ=255) cccAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTAt > 1:367160/1‑150 (MQ=255) cTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCGCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGc < 1:388121/129‑1 (MQ=255) cTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGc > 2:388121/1‑129 (MQ=255) cTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGc < 1:1313395/150‑1 (MQ=255) gcgcgcCCACGGCTATGCCACCCTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGt < 1:30993/150‑1 (MQ=255) gcgcCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTgc < 1:763615/150‑1 (MQ=255) ccAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCaa > 2:443608/1‑150 (MQ=255) cTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCCT‑CCAGCCAAGGCCGGCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAAcgccgc < 2:397842/150‑1 (MQ=255) tATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACgccgcc > 1:195101/1‑150 (MQ=255) tGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAg > 2:74396/1‑150 (MQ=255) ccGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGAACAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAAc > 1:1356056/1‑150 (MQ=255) cGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACa < 2:809229/150‑1 (MQ=255) gTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAg < 2:195101/150‑1 (MQ=255) gTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAg < 2:367160/150‑1 (MQ=255) ccTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACt > 1:1220271/1‑150 (MQ=255) cTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGCTCTAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTg < 1:14855/150‑1 (MQ=255) tGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTgg > 2:1279664/1‑150 (MQ=255) gCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTggg < 2:926747/150‑1 (MQ=255) ccAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCa > 1:1309421/1‑150 (MQ=255) aaCGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATc < 2:1309421/150‑1 (MQ=255) cGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCt < 2:1185280/150‑1 (MQ=255) aGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCaaa > 2:1003399/1‑150 (MQ=255) gCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAAc > 1:612193/1‑150 (MQ=255) aaaTCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCGGGTCCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGa < 1:74396/150‑1 (MQ=255) aaaTCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGa < 1:344217/150‑1 (MQ=255) aaTCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGAt > 1:364198/1‑150 (MQ=255) gTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGAc > 1:1158284/1‑150 (MQ=255) ggctccAGG‑C‑GCGCGGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCcgc > 1:701586/5‑150 (MQ=255) gACCAGGCC‑GCGC‑GCCGGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGa < 1:477059/150‑1 (MQ=255) tccAGG‑C‑GCGCGGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAg > 2:1126676/2‑150 (MQ=255) tccAGG‑C‑GCGCGGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAg > 1:980192/2‑150 (MQ=255) aGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTg < 2:1158284/150‑1 (MQ=255) aGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGAGCAGCAGGGGGATGGCAGCTACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTg < 1:806416/150‑1 (MQ=255) ggCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTgg < 1:1042685/150‑1 (MQ=255) cc‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTgggg < 1:443608/150‑1 (MQ=255) | CCCCCGGGTCAAGGGCAAGGTCACCGTGCGCACCGTCGACCTGCACGACGCCGA‑CGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCC‑GCGC‑GCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGG > NC_002947/1196125‑1196423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |