Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,420,641 Δ1 bp 17.5% intergenic (+81/+26) ctpH → / ← PP_t62 methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,420,6410A.17.5% 174.7 / 34.4 63intergenic (+81/+26)ctpH/PP_t62methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
Reads supporting (aligned to +/- strand):  ref base A (24/28);  new base . (6/5);  total (30/33)
Fisher's exact test for biased strand distribution p-value = 7.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.80e-01

GGCAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAG  >  NC_002947/2420499‑2420782
                                                                                                                                              |                                                                                                                                              
ggCAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCg                                                                                                                                        <  1:692690/150‑1 (MQ=255)
         tGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTtgtg                                                                                                                               >  1:138913/1‑150 (MQ=255)
          gCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGa                                                                                                                              >  2:840983/1‑150 (MQ=255)
          gCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGa                                                                                                                              <  2:148210/150‑1 (MQ=255)
            aTGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACa                                                                                                                            >  2:169935/1‑150 (MQ=255)
               gTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCTTtgtgttgtgt                                                                                                                         <  2:761570/150‑7 (MQ=255)
                    tCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCttt                                                                                                                                  <  2:913915/136‑1 (MQ=255)
                    tCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCttt                                                                                                                                  >  1:913915/1‑136 (MQ=255)
                      aGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGt                                                                                                                  >  1:1281922/1‑150 (MQ=255)
                      aGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGt                                                                                                                  <  1:169935/150‑1 (MQ=255)
                          cAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGCCAACGATTTGGTCGga                                                                                                              <  2:434148/150‑1 (MQ=255)
                          cAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGga                                                                                                              <  1:780748/150‑1 (MQ=255)
                               gggCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGAc                                                                                                         >  1:12645/1‑150 (MQ=255)
                                 gCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCTTtg                                                                                                                                 >  2:649241/1‑124 (MQ=255)
                                 gCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCTTtg                                                                                                                                 <  1:649241/124‑1 (MQ=255)
                                   gAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGa                                                                                                     >  2:1290357/1‑150 (MQ=255)
                                    aaGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGAt                                                                                                    >  2:568233/1‑150 (MQ=255)
                                       tCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCg                                                                                                 >  2:917510/1‑150 (MQ=255)
                                          ccTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAAc                                                                                              <  1:568233/150‑1 (MQ=255)
                                           cTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCTTtgt                                                                                                                                <  2:232586/115‑1 (MQ=255)
                                           cTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCTTtgt                                                                                                                                >  1:232586/1‑115 (MQ=255)
                                            tCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCttt                                                                                                                                  >  2:287888/1‑112 (MQ=255)
                                            tCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCCATGTGCGGGCttt                                                                                                                                  <  1:287888/112‑1 (MQ=255)
                                                   tGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCt                                                                                     >  1:1272203/1‑150 (MQ=255)
                                                    gAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCtt                                                                                    >  2:1393015/1‑150 (MQ=255)
                                                     aGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTtc                                                                                   <  1:917510/150‑1 (MQ=255)
                                                          cTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTc                                                                              >  2:106031/1‑150 (MQ=255)
                                                               tCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGgagaga                                                                                                          <  2:624666/117‑1 (MQ=255)
                                                               tCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGgagaga                                                                                                          >  1:624666/1‑117 (MQ=255)
                                                                   tCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACa                                                                                                        >  1:439195/1‑115 (MQ=255)
                                                                   tCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACa                                                                                                        <  2:439195/115‑1 (MQ=255)
                                                                   tCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACgag                                                                     <  2:138913/150‑1 (MQ=255)
                                                                     tGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGt                                                                               >  2:455608/1‑138 (MQ=255)
                                                                     tGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGt                                                                               <  1:455608/138‑1 (MQ=255)
                                                                                    tGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTccc                                                                            >  2:1167942/1‑126 (MQ=255)
                                                                                    tGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTccc                                                                            <  1:1167942/126‑1 (MQ=255)
                                                                                       cATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCt                                                 >  1:1231977/1‑150 (MQ=255)
                                                                                           gagGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTgcgc                                                  <  2:449538/145‑1 (MQ=255)
                                                                                           gagGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTgcgc                                                  >  1:449538/1‑145 (MQ=255)
                                                                                                    gCCGCGCACTGACGTATTTTTCGAACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGaa                                    <  2:12645/150‑1 (MQ=255)
                                                                                                          cACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAAt                              <  1:895233/150‑1 (MQ=255)
                                                                                                              gACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTa                          <  2:1281922/150‑1 (MQ=255)
                                                                                                                cGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTc                                                                              <  1:755485/96‑1 (MQ=255)
                                                                                                                cGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTc                                                                              >  2:755485/1‑96 (MQ=255)
                                                                                                                    tttttCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCAt                    >  1:678139/1‑150 (MQ=255)
                                                                                                                     ttttCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATc                   <  1:471162/150‑1 (MQ=255)
                                                                                                                         cGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGt               <  2:1231977/150‑1 (MQ=255)
                                                                                                                          gCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACaaaa                               >  2:46795/1‑133 (MQ=255)
                                                                                                                          gCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACaaaa                               <  1:46795/133‑1 (MQ=255)
                                                                                                                           cacacaACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGttt             <  1:840983/150‑1 (MQ=255)
                                                                                                                            acacaacacaAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGtttt            <  1:1393015/150‑1 (MQ=255)
                                                                                                                                aacacaaAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCt        >  2:1246255/1‑150 (MQ=255)
                                                                                                                                aacacaaAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCt        <  2:678139/150‑1 (MQ=255)
                                                                                                                                 acacaaAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTc       <  2:1272203/150‑1 (MQ=255)
                                                                                                                                   acaaAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTgc                                                    <  2:293522/103‑1 (MQ=255)
                                                                                                                                   acaaAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTgc                                                    >  1:293522/1‑103 (MQ=255)
                                                                                                                                   acaaAGCCCGCCATGTGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTGGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGc     >  1:532665/1‑150 (MQ=255)
                                                                                                                                    caaAGCCCGCCATGTGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATc                             <  2:325863/125‑1 (MQ=255)
                                                                                                                                    caaAGCCCGCCATGTGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATc                             >  1:325863/1‑125 (MQ=255)
                                                                                                                                     aaaGCCCGCCATGTGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCaa   >  1:1172081/1‑150 (MQ=255)
                                                                                                                                      aaGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAg  <  1:1290357/150‑1 (MQ=255)
                                                                                                                                        gCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCaa   >  2:702437/1‑147 (MQ=255)
                                                                                                                                        gCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCaa   <  1:702437/147‑1 (MQ=255)
                                                                                                                                             cacaTGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTa                                                >  2:1248857/1‑97 (MQ=255)
                                                                                                                                             cacaTGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTa                                                <  1:1248857/97‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                              
GGCAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAG  >  NC_002947/2420499‑2420782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: